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量化氢键强度:通过固态15N自旋回波MAS NMR测量自组装鸟苷中的2hJNN耦合。

Quantifying hydrogen-bonding strength: the measurement of 2hJNN couplings in self-assembled guanosines by solid-state 15N spin-echo MAS NMR.

作者信息

Pham Tran N, Griffin John M, Masiero Stefano, Lena Stefano, Gottarelli Giovanni, Hodgkinson Paul, Filip Claudiu, Brown Steven P

机构信息

Department of Physics, University of Warwick, Coventry, UK CV4 7AL.

出版信息

Phys Chem Chem Phys. 2007 Jul 14;9(26):3416-23. doi: 10.1039/b703513f. Epub 2007 Apr 25.

Abstract

(2h)J(NN) hydrogen-bond mediated J couplings are measured in the solid state for two synthetic deoxyguanosine derivatives by (15)N MAS NMR spin-echo experiments. The use of rotor-synchronised Hahn-echo pulse train (RS-HEPT) (1)H decoupling, with a duty cycle of 6%, allows spin-echo durations out to 200 ms, hence enabling the accurate determination of J couplings as small as 3.8 Hz. A single-crystal X-ray diffraction structure exists for the shorter alkyl chain derivative dG(C(3))(2): the observation of significantly different (2h)J(NN) couplings, 6.2 +/- 0.4 and 7.4 +/- 0.4 Hz, for the two resolved N7 resonances is to be expected given the NH...N hydrogen-bonding distances of 2.91 and 2.83 A for the two distinct molecules in the asymmetric unit cell. For the longer alkyl chain derivative, dG(C(10))(2), for which there is no single-crystal diffraction structure, a (15)N refocused INADEQUATE spectrum (Pham et al., J. Am. Chem. Soc., 2005, 127, 16018-16019) has demonstrated the presence of N2-H...N7 intermolecular hydrogen-bonds indicative of a quartet-like structure. The (2h)J(NN) hydrogen-bond mediated J coupling of 5.9 +/- 0.2 Hz is at the lower end of the range (5.9-8.2 Hz) of (2h)J(NN) couplings determined from solution-state NMR of guanosine quartets in quadruplex DNA. A full discussion of the determination of error bars on the fitted parameters is given; specifically, error bars determined by a non-linear fitting (using the covariance matrix) or in a Monte-Carlo fashion are found to give effectively identical results.

摘要

通过(15)N MAS NMR自旋回波实验,在固态下测量了两种合成脱氧鸟苷衍生物的(2h)J(NN)氢键介导的J耦合。使用占空比为6%的转子同步哈恩回波脉冲序列(RS-HEPT)进行(1)H去耦,可使自旋回波持续时间达到200 ms,从而能够准确测定低至3.8 Hz的J耦合。较短烷基链衍生物dG(C(3))(2)存在单晶X射线衍射结构:鉴于不对称晶胞中两个不同分子的NH...N氢键距离分别为2.91和2.83 Å,预计两个分辨出的N7共振的(2h)J(NN)耦合会有显著差异,分别为6.2±0.4和7.4±0.4 Hz。对于没有单晶衍射结构的较长烷基链衍生物dG(C(10))(2),(15)N重聚焦INADEQUATE谱(Pham等人,《美国化学会志》,2005年,127卷,16018 - 16019页)已证明存在指示四重态样结构的N2 - H...N7分子间氢键。5.9±0.2 Hz的(2h)J(NN)氢键介导的J耦合处于从四链体DNA中鸟苷四重态的溶液态NMR测定的(2h)J(NN)耦合范围(5.9 - 8.2 Hz)的下限。文中给出了关于拟合参数误差条确定的完整讨论;具体而言,发现通过非线性拟合(使用协方差矩阵)或以蒙特卡罗方式确定的误差条给出的结果实际上相同。

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