• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

内含子在剪接依赖性外显子连接复合体的形成中发挥着重要作用。

Introns play an essential role in splicing-dependent formation of the exon junction complex.

作者信息

Ideue Takashi, Sasaki Yasnory T F, Hagiwara Masatoshi, Hirose Tetsuro

机构信息

Biological Information Research Center, National Institute of Advanced Industrial Science and Technology (AIST), Koto-Ku, Tokyo 135-0064, Japan.

出版信息

Genes Dev. 2007 Aug 15;21(16):1993-8. doi: 10.1101/gad.1557907. Epub 2007 Aug 3.

DOI:10.1101/gad.1557907
PMID:17675447
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1948854/
Abstract

Pre-mRNA splicing specifically deposits the exon junction complex (EJC) onto spliced mRNA, which is important for downstream events. Here, we show that EJC components are primarily recruited to the spliceosome by association with the intron via the intron-binding protein, IBP160. This initial association of EJC components occurs in the absence of the final EJC-binding site on the exon. RNA interference (RNAi) knockdown of IBP160 arrested EJC association with cytoplasmic RNAs following nonsense-mediated decay. We propose that the intron has a crucial role in the early steps of EJC formation and is indispensable for the subsequent formation of a functional EJC.

摘要

前体mRNA剪接特异性地将外显子连接复合体(EJC)沉积到剪接后的mRNA上,这对下游事件很重要。在此,我们表明EJC组分主要通过与内含子结合蛋白IBP160结合而与内含子关联,从而被招募到剪接体上。EJC组分的这种初始关联发生在外显子上最终EJC结合位点缺失的情况下。RNA干扰(RNAi)敲低IBP160会阻止EJC在无义介导的衰变后与细胞质RNA的关联。我们提出,内含子在EJC形成的早期步骤中起关键作用,并且对于随后功能性EJC的形成不可或缺。

相似文献

1
Introns play an essential role in splicing-dependent formation of the exon junction complex.内含子在剪接依赖性外显子连接复合体的形成中发挥着重要作用。
Genes Dev. 2007 Aug 15;21(16):1993-8. doi: 10.1101/gad.1557907. Epub 2007 Aug 3.
2
A spliceosomal intron binding protein, IBP160, links position-dependent assembly of intron-encoded box C/D snoRNP to pre-mRNA splicing.一种剪接体内含子结合蛋白IBP160,将内含子编码的C/D盒小核仁核糖核蛋白(snoRNP)的位置依赖性组装与前体mRNA剪接联系起来。
Mol Cell. 2006 Sep 1;23(5):673-84. doi: 10.1016/j.molcel.2006.07.011.
3
The exon junction complex controls the splicing of MAPK and other long intron-containing transcripts in Drosophila.外显子连接复合物控制着果蝇中 MAPK 和其他含有长内含子的转录本的剪接。
Cell. 2010 Oct 15;143(2):251-62. doi: 10.1016/j.cell.2010.09.014.
4
Splicing of U12-type introns deposits an exon junction complex competent to induce nonsense-mediated mRNA decay.U12型内含子的剪接会沉积一个能够诱导无义介导的mRNA降解的外显子连接复合体。
Proc Natl Acad Sci U S A. 2004 Dec 28;101(52):17976-81. doi: 10.1073/pnas.0408435102. Epub 2004 Dec 17.
5
Splicing remodels messenger ribonucleoprotein architecture via eIF4A3-dependent and -independent recruitment of exon junction complex components.剪接通过依赖和不依赖真核翻译起始因子4A3(eIF4A3)招募外显子连接复合体组分来重塑信使核糖核蛋白结构。
Proc Natl Acad Sci U S A. 2007 Jul 10;104(28):11574-9. doi: 10.1073/pnas.0704946104. Epub 2007 Jul 2.
6
Protein composition of human mRNPs spliced in vitro and differential requirements for mRNP protein recruitment.体外剪接的人源mRNA-蛋白质复合物的蛋白质组成及mRNA-蛋白质复合物蛋白质招募的差异需求
RNA. 2007 Jan;13(1):116-28. doi: 10.1261/rna.336807. Epub 2006 Nov 9.
7
SnoRNP biogenesis meets Pre-mRNA splicing.小核仁核糖核蛋白生物合成与前体信使核糖核酸剪接相遇。
Mol Cell. 2006 Sep 15;23(6):775-6. doi: 10.1016/j.molcel.2006.08.023.
8
The ever-increasing complexities of the exon junction complex.外显子连接复合体日益增加的复杂性。
Curr Opin Cell Biol. 2004 Jun;16(3):279-84. doi: 10.1016/j.ceb.2004.03.012.
9
Mutational analysis of human eIF4AIII identifies regions necessary for exon junction complex formation and nonsense-mediated mRNA decay.人类eIF4AIII的突变分析确定了外显子连接复合体形成和无义介导的mRNA降解所需的区域。
RNA. 2006 Mar;12(3):360-74. doi: 10.1261/rna.2190706.
10
Exon junction complex enhances translation of spliced mRNAs at multiple steps.外显子连接复合体在多个步骤增强剪接后mRNA的翻译。
Biochem Biophys Res Commun. 2009 Jul 3;384(3):334-40. doi: 10.1016/j.bbrc.2009.04.123. Epub 2009 May 3.

引用本文的文献

1
Direct and indirect effects of spliceosome disruption compromise gene regulation by Nonsense-Mediated mRNA Decay.剪接体破坏的直接和间接影响损害了无义介导的mRNA衰变对基因的调控。
bioRxiv. 2024 Dec 27:2024.12.27.630533. doi: 10.1101/2024.12.27.630533.
2
Maturation of small nucleolar RNAs: from production to function.小核仁RNA的成熟:从产生到发挥功能
RNA Biol. 2023 Jan;20(1):715-736. doi: 10.1080/15476286.2023.2254540. Epub 2023 Oct 5.
3
An RNAi screen of RNA helicases identifies eIF4A3 as a regulator of embryonic stem cell identity.RNA 解旋酶的 RNAi 筛选鉴定出 eIF4A3 是胚胎干细胞特性的调节因子。
Nucleic Acids Res. 2022 Nov 28;50(21):12462-12479. doi: 10.1093/nar/gkac1084.
4
Translational repression of NMD targets by GIGYF2 and EIF4E2.GIGYF2 和 EIF4E2 对 NMD 靶标进行翻译抑制。
PLoS Genet. 2021 Oct 19;17(10):e1009813. doi: 10.1371/journal.pgen.1009813. eCollection 2021 Oct.
5
NineTeen Complex-subunit Salsa is required for efficient splicing of a subset of introns and dorsal-ventral patterning.十九复合物亚基萨尔萨对于一组内含子的有效剪接和背腹模式形成是必需的。
RNA. 2020 Dec;26(12):1935-1956. doi: 10.1261/rna.077446.120. Epub 2020 Sep 22.
6
A Day in the Life of the Exon Junction Complex.外显子连接复合物的一天
Biomolecules. 2020 Jun 5;10(6):866. doi: 10.3390/biom10060866.
7
Exon junction complex components Y14 and Mago still play a role in budding yeast.外显子衔接复合物组件 Y14 和 Mago 仍在出芽酵母中发挥作用。
Sci Rep. 2019 Jan 29;9(1):849. doi: 10.1038/s41598-018-36785-3.
8
Transcriptome-wide Interrogation of the Functional Intronome by Spliceosome Profiling.通过剪接体分析进行转录组范围的功能性内含子组检测。
Cell. 2018 May 3;173(4):1031-1044.e13. doi: 10.1016/j.cell.2018.03.062.
9
ICE1 promotes the link between splicing and nonsense-mediated mRNA decay.ICE1 促进剪接和无意义介导的 mRNA 降解之间的联系。
Elife. 2018 Mar 12;7:e33178. doi: 10.7554/eLife.33178.
10
Arsenic exposure during embryonic development alters the expression of the long noncoding RNA growth arrest specific-5 (Gas5) in a sex-dependent manner.胚胎发育过程中砷暴露以性别依赖的方式改变长链非编码 RNA 生长停滞特异性 5(Gas5)的表达。
Neurotoxicol Teratol. 2018 Mar-Apr;66:102-112. doi: 10.1016/j.ntt.2017.11.003. Epub 2017 Nov 11.

本文引用的文献

1
Identification and characterization of human non-coding RNAs with tissue-specific expression.具有组织特异性表达的人类非编码RNA的鉴定与表征
Biochem Biophys Res Commun. 2007 Jun 15;357(4):991-6. doi: 10.1016/j.bbrc.2007.04.034. Epub 2007 Apr 17.
2
The interaction between cap-binding complex and RNA export factor is required for intronless mRNA export.无内含子mRNA的输出需要帽结合复合体与RNA输出因子之间的相互作用。
J Biol Chem. 2007 May 25;282(21):15645-51. doi: 10.1074/jbc.M700629200. Epub 2007 Mar 15.
3
Human mRNA export machinery recruited to the 5' end of mRNA.人类信使核糖核酸(mRNA)输出机制被招募至mRNA的5'端。
Cell. 2006 Dec 29;127(7):1389-400. doi: 10.1016/j.cell.2006.10.044.
4
Protein composition of human mRNPs spliced in vitro and differential requirements for mRNP protein recruitment.体外剪接的人源mRNA-蛋白质复合物的蛋白质组成及mRNA-蛋白质复合物蛋白质招募的差异需求
RNA. 2007 Jan;13(1):116-28. doi: 10.1261/rna.336807. Epub 2006 Nov 9.
5
A spliceosomal intron binding protein, IBP160, links position-dependent assembly of intron-encoded box C/D snoRNP to pre-mRNA splicing.一种剪接体内含子结合蛋白IBP160,将内含子编码的C/D盒小核仁核糖核蛋白(snoRNP)的位置依赖性组装与前体mRNA剪接联系起来。
Mol Cell. 2006 Sep 1;23(5):673-84. doi: 10.1016/j.molcel.2006.07.011.
6
Mutational analysis of human eIF4AIII identifies regions necessary for exon junction complex formation and nonsense-mediated mRNA decay.人类eIF4AIII的突变分析确定了外显子连接复合体形成和无义介导的mRNA降解所需的区域。
RNA. 2006 Mar;12(3):360-74. doi: 10.1261/rna.2190706.
7
Biochemical analysis of the EJC reveals two new factors and a stable tetrameric protein core.外显子连接复合体(EJC)的生化分析揭示了两个新因子和一个稳定的四聚体蛋白核心。
RNA. 2005 Dec;11(12):1869-83. doi: 10.1261/rna.2155905.
8
The exon junction core complex is locked onto RNA by inhibition of eIF4AIII ATPase activity.外显子连接核心复合体通过抑制eIF4AIII的ATP酶活性而锁定在RNA上。
Nat Struct Mol Biol. 2005 Oct;12(10):861-9. doi: 10.1038/nsmb990. Epub 2005 Sep 18.
9
Splicing of U12-type introns deposits an exon junction complex competent to induce nonsense-mediated mRNA decay.U12型内含子的剪接会沉积一个能够诱导无义介导的mRNA降解的外显子连接复合体。
Proc Natl Acad Sci U S A. 2004 Dec 28;101(52):17976-81. doi: 10.1073/pnas.0408435102. Epub 2004 Dec 17.
10
A subset of human 35S U5 proteins, including Prp19, function prior to catalytic step 1 of splicing.一部分人类35S U5蛋白,包括Prp19,在剪接的催化步骤1之前发挥作用。
EMBO J. 2004 Jun 16;23(12):2381-91. doi: 10.1038/sj.emboj.7600241. Epub 2004 Jun 3.