te Velthuis Aartjan J W, Admiraal Jeroen F, Bagowski Christoph P
Department of Molecular and Cellular Biology, Institute of Biology, Leiden University, AL Leiden, 2333, The Netherlands.
BMC Evol Biol. 2007 Aug 2;7:129. doi: 10.1186/1471-2148-7-129.
Development, differentiation and physiology of metazoans all depend on cell to cell communication and subsequent intracellular signal transduction. Often, these processes are orchestrated via sites of specialized cell-cell contact and involve receptors, adhesion molecules and scaffolding proteins. Several of these scaffolding proteins important for synaptic and cellular junctions belong to the large family of membrane-associated guanylate kinases (MAGUK). In order to elucidate the origin and the evolutionary history of the MAGUKs we investigated full-length cDNA, EST and genomic sequences of species in major phyla.
Our results indicate that at least four of the seven MAGUK subfamilies were present in early metazoan lineages, such as Porifera. We employed domain sequence and structure based methods to infer a model for the evolutionary history of the MAGUKs. Notably, the phylogenetic trees for the guanylate kinase (GK)-, the PDZ- and the SH3-domains all suggested a matching evolutionary model which was further supported by molecular modeling of the 3D structures of different GK domains. We found no MAGUK in plants, fungi or other unicellular organisms, which suggests that the MAGUK core structure originated early in metazoan history.
In summary, we have characterized here the molecular and structural evolution of the large MAGUK family. Using the MAGUKs as an example, our results show that it is possible to derive a highly supported evolutionary model for important multidomain families by analyzing encoded protein domains. It further suggests that larger superfamilies encoded in the different genomes can be analyzed in a similar manner.
后生动物的发育、分化和生理功能均依赖于细胞间通讯及随后的细胞内信号转导。通常,这些过程是通过特化的细胞间接触位点来协调的,并且涉及受体、黏附分子和支架蛋白。其中一些对突触和细胞连接很重要的支架蛋白属于膜相关鸟苷酸激酶(MAGUK)大家族。为了阐明MAGUK的起源和进化史,我们研究了主要门类物种的全长cDNA、EST和基因组序列。
我们的结果表明,七个MAGUK亚家族中至少有四个存在于早期后生动物谱系中,如多孔动物门。我们采用基于结构域序列和结构的方法来推断MAGUK的进化史模型。值得注意的是,鸟苷酸激酶(GK)结构域、PDZ结构域和SH3结构域的系统发育树均显示出匹配的进化模型,不同GK结构域三维结构的分子建模进一步支持了这一模型。我们在植物、真菌或其他单细胞生物中未发现MAGUK,这表明MAGUK核心结构起源于后生动物历史早期。
总之,我们在此描述了大型MAGUK家族的分子和结构进化。以MAGUK为例,我们的结果表明,通过分析编码的蛋白质结构域,可以得出一个得到高度支持的重要多结构域家族的进化模型。这进一步表明,可以以类似的方式分析不同基因组中编码的更大的超家族。