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黏附连接蛋白基因家族在原生动物中的进化。

Evolution of the MAGUK protein gene family in premetazoan lineages.

机构信息

Departament de Genètica, Universitat de Barcelona, Barcelona, Spain.

出版信息

BMC Evol Biol. 2010 Apr 1;10:93. doi: 10.1186/1471-2148-10-93.

Abstract

BACKGROUND

Cell-to-cell communication is a key process in multicellular organisms. In multicellular animals, scaffolding proteins belonging to the family of membrane-associated guanylate kinases (MAGUK) are involved in the regulation and formation of cell junctions. These MAGUK proteins were believed to be exclusive to Metazoa. However, a MAGUK gene was recently identified in an EST survey of Capsaspora owczarzaki, an unicellular organism that branches off near the metazoan clade. To further investigate the evolutionary history of MAGUK, we have undertook a broader search for this gene family using available genomic sequences of different opisthokont taxa.

RESULTS

Our survey and phylogenetic analyses show that MAGUK proteins are present not only in Metazoa, but also in the choanoflagellate Monosiga brevicollis and in the protist Capsaspora owczarzaki. However, MAGUKs are absent from fungi, amoebozoans or any other eukaryote. The repertoire of MAGUKs in Placozoa and eumetazoan taxa (Cnidaria + Bilateria) is quite similar, except for one class that is missing in Trichoplax, while Porifera have a simpler MAGUK repertoire. However, Vertebrata have undergone several independent duplications and exhibit two exclusive MAGUK classes. Three different MAGUK types are found in both M. brevicollis and C. owczarzaki: DLG, MPP and MAGI. Furthermore, M. brevicollis has suffered a lineage-specific diversification.

CONCLUSIONS

The diversification of the MAGUK protein gene family occurred, most probably, prior to the divergence between Metazoa+choanoflagellates and the Capsaspora+Ministeria clade. A MAGI-like, a DLG-like, and a MPP-like ancestral genes were already present in the unicellular ancestor of Metazoa, and new gene members have been incorporated through metazoan evolution within two major periods, one before the sponge-eumetazoan split and another within the vertebrate lineage. Moreover, choanoflagellates have suffered an independent MAGUK diversification. This study highlights the importance of generating enough genome data from the broadest possible taxonomic sampling, in order to fully understand the evolutionary history of major protein gene families.

摘要

背景

细胞间通讯是多细胞生物的关键过程。在多细胞动物中,属于膜相关鸟苷酸激酶(MAGUK)家族的支架蛋白参与细胞连接的调节和形成。这些 MAGUK 蛋白被认为是 Metazoa 所独有的。然而,最近在单细胞生物 Capsaspora owczarzaki 的 EST 调查中发现了一个 MAGUK 基因,Capsaspora owczarzaki 分支接近后生动物群。为了进一步研究 MAGUK 的进化历史,我们使用不同后生动物分类群的可用基因组序列对这个基因家族进行了更广泛的搜索。

结果

我们的调查和系统发育分析表明,MAGUK 蛋白不仅存在于 Metazoa 中,也存在于领鞭毛虫 Monosiga brevicollis 和原生动物 Capsaspora owczarzaki 中。然而,真菌、变形虫或任何其他真核生物中都不存在 MAGUK。扁盘动物和后生动物类群(刺胞动物+两侧对称动物)的 MAGUK 谱非常相似,除了 Trichoplax 缺失一类,而多孔动物的 MAGUK 谱较为简单。然而,脊椎动物经历了几次独立的复制,表现出两种独特的 MAGUK 类。在 M. brevicollis 和 C. owczarzaki 中发现了三种不同的 MAGUK 类型:DLG、MPP 和 MAGI。此外,M. brevicollis 经历了谱系特异性多样化。

结论

MAGUK 蛋白基因家族的多样化很可能发生在 Metazoa+领鞭毛虫和 Capsaspora+Ministeria 分支分化之前。一个 MAGI 样、一个 DLG 样和一个 MPP 样的祖先基因已经存在于 Metazoa 的单细胞祖先中,并且新的基因成员通过后生动物的进化在两个主要时期内被合并,一个在海绵后生动物分裂之前,另一个在脊椎动物谱系内。此外,领鞭毛虫经历了独立的 MAGUK 多样化。本研究强调了从尽可能广泛的分类采样中生成足够的基因组数据的重要性,以便充分了解主要蛋白基因家族的进化历史。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6f3/2859873/431235b6a729/1471-2148-10-93-1.jpg

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