Wertz Sophie, Degrange Valérie, Prosser James I, Poly Franck, Commeaux Claire, Guillaumaud Nadine, Le Roux Xavier
Université de Lyon, UMR 5557 Ecologie Microbienne (CNRS, Université Lyon 1, USC INRA 1196), bat. G. Mendel, 43 boulevard du 11 novembre 1918, 69622 Villeurbanne, France.
Environ Microbiol. 2007 Sep;9(9):2211-9. doi: 10.1111/j.1462-2920.2007.01335.x.
Analysing the consequences of the decrease in biodiversity for ecosystem functioning and stability has been a major concern in ecology. However, the impact of decline in soil microbial diversity on ecosystem sustainability remains largely unknown. This has been assessed for decomposition, which is insured by a large proportion of the soil microbial community, but not for more specialized and less diverse microbial groups. We determined the impact of a decrease in soil microbial diversity on the stability (i.e. resistance and resilience following disturbance) of two more specialized bacterial functional groups: denitrifiers and nitrite oxidizers. Soil microbial diversity was reduced using serial dilutions of a suspension obtained from a non-sterile soil that led to loss of species with low cell abundance, inoculation of microcosms of the same sterile soil with these serial dilutions, and subsequent incubation to enable establishment of similar cell abundances between treatments. The structure, cell abundance and activity of denitrifying and nitrite-oxidizing communities were characterized after incubation. Increasing dilution led to a progressive decrease in community diversity as assessed by the number of denaturating gradient gel electrophoresis (DGGE) bands, while community functioning was not impaired when cell abundance recovered after incubation. The microcosms were then subjected to a model disturbance: heating to 42 degrees C for 24 h. Abundance, structure and activity of each community were measured 3 h after completion of the disturbance to assess resistance, and after incubation of microcosms for 1 month to assess resilience. Resistance and resilience to the disturbance differed between the two communities, nitrite oxidizers being more affected. However, reducing the diversity of the two microbial functional groups did not impair either their resistance or their resilience following the disturbance. These results demonstrate the low sensitivity of the resistance and resilience of both microbial groups to diversity decline provided that cell abundance is similar between treatments.
分析生物多样性减少对生态系统功能和稳定性的影响一直是生态学中的一个主要关注点。然而,土壤微生物多样性下降对生态系统可持续性的影响在很大程度上仍然未知。对于由大部分土壤微生物群落保障的分解作用已进行了评估,但对于更特殊且多样性较低的微生物群体尚未评估。我们确定了土壤微生物多样性降低对两个更特殊的细菌功能群(反硝化细菌和亚硝酸盐氧化菌)稳定性(即受到干扰后的抗性和恢复力)的影响。通过对从非无菌土壤获得的悬浮液进行系列稀释来降低土壤微生物多样性,这导致低细胞丰度物种的丧失,用这些系列稀释液接种相同无菌土壤的微观世界,随后进行培养以使各处理之间建立相似的细胞丰度。培养后对反硝化和亚硝酸盐氧化群落的结构、细胞丰度和活性进行了表征。如通过变性梯度凝胶电泳(DGGE)条带数量评估的那样,稀释度增加导致群落多样性逐渐降低,而培养后细胞丰度恢复时群落功能并未受损。然后对微观世界施加一种模拟干扰:加热至42摄氏度持续24小时。在干扰完成3小时后测量每个群落的丰度、结构和活性以评估抗性,在微观世界培养1个月后测量以评估恢复力。两个群落对干扰的抗性和恢复力不同,亚硝酸盐氧化菌受影响更大。然而,降低这两个微生物功能群的多样性并未损害它们在干扰后的抗性或恢复力。这些结果表明,只要各处理之间细胞丰度相似,这两个微生物群体的抗性和恢复力对多样性下降的敏感性较低。