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奥地利基因组组织库(GATiB)。

The Genome Austria Tissue Bank (GATiB).

作者信息

Asslaber M, Abuja P M, Stark K, Eder J, Gottweis H, Trauner M, Samonigg H, Mischinger H J, Schippinger W, Berghold A, Denk H, Zatloukal K

机构信息

Institute of Pathology, Medical University of Graz, Graz, Austria.

出版信息

Pathobiology. 2007;74(4):251-8. doi: 10.1159/000104453.

Abstract

In the context of the Austrian Genome Program, a tissue bank is being established (Genome Austria Tissue Bank, GATiB) which is based on a collection of diseased and corresponding normal tissues representing a great variety of diseases at their natural frequency of occurrence from a non-selected Central European population of more than 700,000 patients. Major emphasis is put on annotation of archival tissue with comprehensive clinical data, including follow-up data. A specific IT infrastructure supports sample annotation, tracking of sample usage as well as sample and data storage. Innovative data protection tools were developed which prevent sample donor re-identification, particularly if detailed medical and genetic data are combined. For quality control of old archival tissues, new techniques were established to check RNA quality and antigen stability. Since 2003, GATiB has changed from a population-based tissue bank to a disease-focused biobank comprising major cancers such as colon, breast, liver, as well as metabolic liver diseases and organs affected by the metabolic syndrome. Prospectively collected tissues are associated with blood samples and detailed data on the sample donor's disease, lifestyle and environmental exposure, following standard operating procedures. Major emphasis is also placed on ethical, legal and social issues (ELSI) related to biobanks. A specific research project and an international advisory board ensure the proper embedding of GATiB in society and facilitate international networking.

摘要

在奥地利基因组计划的背景下,正在建立一个组织库(奥地利基因组组织库,GATiB),该组织库基于对患病组织和相应正常组织的收集,这些组织代表了来自一个超过70万患者的未经过筛选的中欧人群中各种疾病的自然发生频率。主要重点是用全面的临床数据,包括随访数据,对存档组织进行注释。一个特定的信息技术基础设施支持样本注释、样本使用跟踪以及样本和数据存储。开发了创新的数据保护工具,可防止样本捐赠者被重新识别,特别是在详细的医学和基因数据相结合的情况下。为了对旧的存档组织进行质量控制,建立了新技术来检查RNA质量和抗原稳定性。自2003年以来,GATiB已从一个基于人群的组织库转变为一个以疾病为重点的生物样本库,包括结肠癌、乳腺癌、肝癌等主要癌症,以及代谢性肝病和受代谢综合征影响的器官。按照标准操作程序,前瞻性收集的组织与血液样本以及关于样本捐赠者疾病、生活方式和环境暴露的详细数据相关联。还主要强调了与生物样本库相关的伦理、法律和社会问题(ELSI)。一个特定的研究项目和一个国际咨询委员会确保GATiB在社会中得到妥善安置,并促进国际网络建设。

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