• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于ISSR多态性的濒危植物香果树遗传结构及其保护意义

Genetic structure of endangered Emmenopterys henryi Oliv. based on ISSR polymorphism and implications for its conservation.

作者信息

Li Jun-Min, Jin Ze-Xin

机构信息

Institute of Ecology, Taizhou University, Linhai, Zhejiang 317000, PR China.

出版信息

Genetica. 2008 Jul;133(3):227-34. doi: 10.1007/s10709-007-9204-z. Epub 2007 Sep 8.

DOI:10.1007/s10709-007-9204-z
PMID:17828435
Abstract

Inter-simple sequence repeat (ISSR) markers were used to determine the genetic variation and genetic differentiation of nine populations of Emmenopterys henryi Oliv., an endangered plant endemic to China. Relatively low genetic diversity was detected at population level (the percentage of polymorphic loci P=22.56%, the number of alleles per locus A=1.183+/-0.045, the effective number of alleles per locus A(E)=1.007+/-0.345, Nei's gene diversity h=0.071+/-0.017, Shannon information index I=0.104+/-0.025). However, the genetic diversity at species level was relatively high (P=56.05%; A=1.561+/-0.498, A(E)=1.325+/-0.371, h=0.191+/-0.199, I=0.287+/-0.284). Analysis of molecular variance showed that most of the ISSR variation (68.03%) in E. henryi occurred among populations. The estimated Nm from F (ST )was 0.235. It indicated that the fragmentation and isolation of populations might result from specific evolutionary history and anthropogenic activity. Consequently, genetic drift might play an important role in determining the genetic structure of E. henryi. Conservation strategies for this endangered species are proposed based on the genetic data.

摘要

利用简单序列重复区间(ISSR)标记来测定中国特有的濒危植物香果树9个种群的遗传变异和遗传分化。在种群水平上检测到相对较低的遗传多样性(多态位点百分比P = 22.56%,每个位点的等位基因数A = 1.183±0.045,每个位点的有效等位基因数A(E)= 1.007±0.345,Nei氏基因多样性h = 0.071±0.017,香农信息指数I = 0.104±0.025)。然而,在物种水平上遗传多样性相对较高(P = 56.05%;A = 1.561±0.498,A(E)= 1.325±0.371,h = 0.191±0.199,I = 0.287±0.284)。分子方差分析表明,香果树的ISSR变异大部分(68.03%)发生在种群间。根据F(ST)估计的Nm为0.235。这表明种群的片段化和隔离可能是由特定的进化历史和人为活动导致的。因此,遗传漂变可能在决定香果树的遗传结构中起重要作用。基于遗传数据提出了针对这种濒危物种的保护策略。

相似文献

1
Genetic structure of endangered Emmenopterys henryi Oliv. based on ISSR polymorphism and implications for its conservation.基于ISSR多态性的濒危植物香果树遗传结构及其保护意义
Genetica. 2008 Jul;133(3):227-34. doi: 10.1007/s10709-007-9204-z. Epub 2007 Sep 8.
2
Development and characterization of microsatellite markers for Emmenopterys henryi (Rubiaceae), a rare tree from China.开发和鉴定中国珍稀树种翅荚木(茜草科)微卫星标记
Am J Bot. 2012 Apr;99(4):e179-81. doi: 10.3732/ajb.1100495. Epub 2012 Apr 2.
3
Genetic diversity and differentiation of the endangered and endemic species Sauvagesia rhodoleuca in China as detected by ISSR analysis.通过ISSR分析检测中国濒危特有物种红毛野海棠的遗传多样性与分化
Genet Mol Res. 2014 Oct 20;13(4):8258-67. doi: 10.4238/2014.October.20.2.
4
Assessment of genetic diversity in the endangered populations of Breonadia salicina (Rubiaceae) growing in the kingdom of Saudi Arabia using inter-simple sequence repeat markers.利用简单重复序列区间标记评估沙特阿拉伯王国境内生长的濒危柳叶菜科布氏木种群的遗传多样性。
BMC Genet. 2014 Oct 3;15:109. doi: 10.1186/s12863-014-0109-4.
5
Genetic structure within and among populations of Saruma henryi, an endangered plant endemic to China.中国特有的濒危植物皱皮木瓜种群内和种群间的遗传结构。
Biochem Genet. 2012 Feb;50(1-2):146-58. doi: 10.1007/s10528-011-9488-7. Epub 2012 Jan 1.
6
A study of conservation genetics in Cupressus chengiana, an endangered endemic of China, using ISSR markers.利用ISSR标记对中国特有濒危植物岷江柏木进行保护遗传学研究。
Biochem Genet. 2006 Feb;44(1-2):31-45. doi: 10.1007/s10528-006-9011-8. Epub 2006 May 3.
7
[ISSR analysis on genetic diversity of endangered relic shrub Sinocalycanthus chinensis].濒危孑遗灌木夏蜡梅遗传多样性的ISSR分析
Ying Yong Sheng Tai Xue Bao. 2007 Feb;18(2):247-53.
8
Genetic diversity in wild Dipsacus chinensis populations from China based on ISSR markers.基于ISSR标记的中国野生川续断居群的遗传多样性
Genet Mol Res. 2013 Apr 12;12(2):1205-13. doi: 10.4238/2013.April.12.7.
9
Molecular diversity and relationships among Cymbidium goeringii cultivars based on inter-simple sequence repeat (ISSR) markers.基于简单序列重复区间(ISSR)标记的春兰品种分子多样性及亲缘关系
Genetica. 2009 Jul;136(3):391-9. doi: 10.1007/s10709-008-9340-0. Epub 2008 Dec 17.
10
[A study of the diversity of different geographical populations of Emmenopterys henryi using FTIR based on principal component analysis and cluster analysis].基于主成分分析和聚类分析的傅里叶变换红外光谱法对香果树不同地理种群多样性的研究
Guang Pu Xue Yu Guang Pu Fen Xi. 2008 Sep;28(9):2081-6.

引用本文的文献

1
Molecular Fingerprinting and Phytochemical Investigation of L. from Different Agro-Ecological Zones of India.印度不同农业生态区的[植物名称未给出]的分子指纹图谱和植物化学研究
Plants (Basel). 2023 Feb 17;12(4):931. doi: 10.3390/plants12040931.
2
Variation of phenotypic and physiological traits of Robinia pseudoacacia L. from 20 provenances.20 个种源刺槐表型和生理特性的变异。
PLoS One. 2022 Jan 5;17(1):e0262278. doi: 10.1371/journal.pone.0262278. eCollection 2022.
3
Molecular and ecological investigations on the wild populations of Glycyrrhiza L. taxa distributed in the East Mediterranean Area of Turkey.

本文引用的文献

1
Amplification of DNA markers from evolutionarily diverse genomes using single primers of simple-sequence repeats.利用简单重复序列的单引物从进化上多样化的基因组中扩增 DNA 标记。
Theor Appl Genet. 1994 Dec;89(7-8):998-1006. doi: 10.1007/BF00224530.
2
[ISSR analysis on genetic diversity of endangered relic shrub Sinocalycanthus chinensis].濒危孑遗灌木夏蜡梅遗传多样性的ISSR分析
Ying Yong Sheng Tai Xue Bao. 2007 Feb;18(2):247-53.
3
THE NUMBER OF ALLELES THAT CAN BE MAINTAINED IN A FINITE POPULATION.有限种群中能够维持的等位基因数量。
对分布于土耳其东地中海地区的甘草属植物野生种群的分子与生态学研究。
J Plant Res. 2016 Nov;129(6):1021-1032. doi: 10.1007/s10265-016-0864-6. Epub 2016 Sep 21.
4
Contributions of historical and contemporary geographic and environmental factors to phylogeographic structure in a Tertiary relict species, Emmenopterys henryi (Rubiaceae).历史和当代地理及环境因素对第三纪残遗物种香果树(茜草科)系统发育地理结构的贡献。
Sci Rep. 2016 May 3;6:24041. doi: 10.1038/srep24041.
5
Effect of Yangtze River on population genetic structure of the relict plant Parrotia subaequalis in eastern China.长江对中国东部孑遗植物小叶朴种群遗传结构的影响。
Ecol Evol. 2015 Oct 5;5(20):4617-27. doi: 10.1002/ece3.1734. eCollection 2015 Oct.
6
Molecular genetic diversity of Satureja bachtiarica.沙芥的分子遗传多样性。
Mol Biol Rep. 2013 Nov;40(11):6501-8. doi: 10.1007/s11033-013-2768-z. Epub 2013 Oct 6.
7
Genetic analysis and marker assisted identification of life phases of red alga Gracilaria corticata (J. Agardh).红藻石花菜生活史各阶段的遗传分析与标记辅助鉴定。
Mol Biol Rep. 2011 Aug;38(6):4211-8. doi: 10.1007/s11033-010-0543-y. Epub 2010 Nov 30.
Genetics. 1964 Apr;49(4):725-38. doi: 10.1093/genetics/49.4.725.
4
Genetic diversity in european and Argentinian cultivated potatoes (Solanum tuberosum subsp. tuberosum) detected by inter-simple sequence repeats (ISSRs).利用简单重复序列区间(ISSRs)检测欧洲和阿根廷栽培马铃薯(Solanum tuberosum subsp. tuberosum)的遗传多样性。
Genome. 2002 Jun;45(3):481-4. doi: 10.1139/g02-002.
5
Effects of population disjunction on isozyme variation in the widespread Pilgerodendron uviferum.种群间断对分布广泛的智利柏同工酶变异的影响。
Heredity (Edinb). 2001 Sep;87(Pt 3):337-43. doi: 10.1046/j.1365-2540.2001.00906.x.
6
Assessing hybridization in natural populations of Penstemon (Scrophulariaceae) using hypervariable intersimple sequence repeat (ISSR) bands.利用高变简单重复序列区间(ISSR)条带评估钓钟柳属(玄参科)自然种群中的杂交现象。
Mol Ecol. 1998 Sep;7(9):1107-25. doi: 10.1046/j.1365-294x.1998.00425.x.
7
TreeView: an application to display phylogenetic trees on personal computers.树形视图:一款在个人电脑上显示系统发育树的应用程序。
Comput Appl Biosci. 1996 Aug;12(4):357-8. doi: 10.1093/bioinformatics/12.4.357.
8
Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification.通过简单序列重复(SSR)锚定聚合酶链反应扩增进行基因组指纹分析。
Genomics. 1994 Mar 15;20(2):176-83. doi: 10.1006/geno.1994.1151.
9
The detection of disease clustering and a generalized regression approach.疾病聚集性的检测及一种广义回归方法。
Cancer Res. 1967 Feb;27(2):209-20.
10
Analysis of gene diversity in subdivided populations.细分群体中的基因多样性分析。
Proc Natl Acad Sci U S A. 1973 Dec;70(12):3321-3. doi: 10.1073/pnas.70.12.3321.