Yamada A, Inoue T, Noda S, Hongoh Y, Ohkuma M
Environmental Molecular Biology Laboratory, RIKEN, Hirosawa 2-1, Wako, Saitama 351-0198, Japan.
Mol Ecol. 2007 Sep;16(18):3768-77. doi: 10.1111/j.1365-294X.2007.03326.x.
Nitrogen fixation by gut microorganisms is one of the crucial aspects of symbiosis in wood-feeding termites since these termites thrive on a nitrogen-poor diet. In order to understand the evolution of this symbiosis, we analysed the nitrogenase structural gene nifH in the gut microbial communities. In conjunction with the published sequences, we compared approximately 320 putatively functional NifH protein sequences obtained from a total of 19 termite samples that represent all the major branches of their currently proposed phylogeny, and from one species of the cockroach Cryptocercus that shares a common ancestor with termites. Using multivariate techniques for clustering and ordination, a phylogeny of NifH protein sequences was created and plotted variously with host termite families, genera, and species. Close concordance was observed between NifH communities and the host termites at genus level, but family level relationships were not always congruent with accepted termite clade structure. Host groups examined included basal families (Mastotermitidae, Termopsidae, Kalotermitidae, as well as Cryptocercus), the most derived lower termite family Rhinotermitidae, and subfamilies representing the advanced and highly diverse apical family Termitidae (Macrotermitinae, Termitinae, and Nasutitermitinae). This selection encompassed the major nesting and feeding styles recognized in termites, and it was evident that NifH phylogenetic divergence, as well as the occurrence of alternative nitrogenase-type NifH, was to some extent dependent on host lifestyle as well as phylogenetic position.
肠道微生物进行的固氮作用是食木白蚁共生关系的关键方面之一,因为这些白蚁依靠低氮食物生存。为了了解这种共生关系的进化过程,我们分析了肠道微生物群落中的固氮酶结构基因nifH。结合已发表的序列,我们比较了从总共19个白蚁样本中获得的约320个假定具有功能的NifH蛋白序列,这些样本代表了当前提出的系统发育的所有主要分支,还包括来自与白蚁有共同祖先的一种蟑螂隐尾蠊的样本。使用多变量聚类和排序技术,构建了NifH蛋白序列的系统发育树,并分别按照宿主白蚁的科、属和种进行绘制。在属水平上,观察到NifH群落与宿主白蚁之间有密切的一致性,但科水平上的关系并不总是与公认的白蚁进化枝结构一致。所研究的宿主群体包括基部类群(木白蚁科、原白蚁科、澳白蚁科,以及隐尾蠊)、最进化的低等白蚁科鼻白蚁科,以及代表高等且高度多样化的顶端科白蚁科的亚科(大白蚁亚科、白蚁亚科和象白蚁亚科)。这种选择涵盖了白蚁中公认的主要筑巢和取食方式,很明显,NifH系统发育分歧以及替代型固氮酶类NifH的出现,在一定程度上取决于宿主的生活方式以及系统发育位置。