Suppr超能文献

质子结合的同二聚体:结合能与质子亲和力有怎样的关系?

Proton-bound homodimers: how are the binding energies related to proton affinities?

作者信息

Chan Bun, Del Bene Janet E, Radom Leo

机构信息

School of Chemistry and Centre of Excellence in Free Radical Chemistry and Biotechnology, University of Sydney, Sydney, NSW 2006, Australia.

出版信息

J Am Chem Soc. 2007 Oct 10;129(40):12197-9. doi: 10.1021/ja072690d. Epub 2007 Sep 18.

Abstract

High-level quantum chemical calculations [G3(MP2)-RAD//MP2/6-31+G(d,p)] have been employed to investigate the relationship between the binding energy (BE) of a substrate (X) and its protonated form [H-X]+ with the proton affinity (PA) of the substrate (X) in several series of protonated homodimers ([X...H-X]+). We find that for each series of closely related substrates, the binding energy (BE) is correlated with the proton affinity (PA) in an approximately quadratic manner. Thus, for a given series, the BE initially increases in magnitude with increasing PA, reaches a point of maximum binding, and then becomes smaller as the PA increases further. This behavior can be attributed to the competing effects of the exothermic partial protonation of the substrate and the endothermic partial deprotonation of the protonated substrate. As the PA increases, protonation of X contributes to increased binding but the penalty for partial deprotonation of [H-X]+ also increases. Once the PA becomes sufficiently high, the penalty for the partial deprotonation of [H-X]+ dominates, leading to maximum binding occurring at intermediate PA.

摘要

已采用高水平量子化学计算方法[G3(MP2)-RAD//MP2/6-31+G(d,p)]来研究底物(X)及其质子化形式[H-X]+的结合能(BE)与底物(X)在几个质子化同二聚体系列([X...H-X]+)中的质子亲和势(PA)之间的关系。我们发现,对于每一系列密切相关的底物,结合能(BE)与质子亲和势(PA)大致呈二次相关。因此,对于给定的系列,BE最初随着PA的增加而增大,达到最大结合点,然后随着PA的进一步增加而变小。这种行为可归因于底物的放热部分质子化和质子化底物的吸热部分去质子化的竞争效应。随着PA的增加,X的质子化有助于增强结合,但[H-X]+部分去质子化的代价也会增加。一旦PA变得足够高,[H-X]+部分去质子化的代价就会占主导,导致在中等PA时出现最大结合。

相似文献

1
Proton-bound homodimers: how are the binding energies related to proton affinities?
J Am Chem Soc. 2007 Oct 10;129(40):12197-9. doi: 10.1021/ja072690d. Epub 2007 Sep 18.
3
On the relationship between the preferred site of hydrogen bonding and protonation.
J Phys Chem A. 2005 Jun 23;109(24):5509-17. doi: 10.1021/jp0516994.
6
Ab initio study of hydrogen-bond formation between aliphatic and phenolic hydroxy groups and selected amino acid side chains.
J Phys Chem A. 2008 May 8;112(18):4342-54. doi: 10.1021/jp7108847. Epub 2008 Mar 29.
8
Pseudo-Jahn-Teller origin of the low barrier hydrogen bond in N(2)H(7) (+).
J Chem Phys. 2008 Sep 28;129(12):124313. doi: 10.1063/1.2980053.
9
Thermodynamics and mechanisms for decomposition of protonated glycine and its protonated dimer.
J Phys Chem A. 2011 Oct 20;115(41):11144-55. doi: 10.1021/jp2025939. Epub 2011 Apr 20.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验