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基于微阵列的高通量重测序基因组选择

Microarray-based genomic selection for high-throughput resequencing.

作者信息

Okou David T, Steinberg Karyn Meltz, Middle Christina, Cutler David J, Albert Thomas J, Zwick Michael E

机构信息

Department of Human Genetics, Emory University School of Medicine, 615 Michael Street, Suite 301, Atlanta, Georgia 30322, USA.

出版信息

Nat Methods. 2007 Nov;4(11):907-9. doi: 10.1038/nmeth1109. Epub 2007 Oct 14.

DOI:10.1038/nmeth1109
PMID:17934469
Abstract

We developed a general method, microarray-based genomic selection (MGS), capable of selecting and enriching targeted sequences from complex eukaryotic genomes without the repeat blocking steps necessary for bacterial artificial chromosome (BAC)-based genomic selection. We demonstrate that large human genomic regions, on the order of hundreds of kilobases, can be enriched and resequenced with resequencing arrays. MGS, when combined with a next-generation resequencing technology, can enable large-scale resequencing in single-investigator laboratories.

摘要

我们开发了一种通用方法——基于微阵列的基因组选择(MGS),它能够从复杂的真核生物基因组中选择并富集目标序列,而无需进行基于细菌人工染色体(BAC)的基因组选择所必需的重复序列阻断步骤。我们证明,数百千碱基规模的大型人类基因组区域可以通过重测序阵列进行富集和重测序。当MGS与新一代重测序技术相结合时,单研究人员实验室也能够进行大规模重测序。

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Microarray-based genomic selection for high-throughput resequencing.基于微阵列的高通量重测序基因组选择
Nat Methods. 2007 Nov;4(11):907-9. doi: 10.1038/nmeth1109. Epub 2007 Oct 14.
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Direct selection of human genomic loci by microarray hybridization.通过微阵列杂交直接选择人类基因组位点。
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Enrichment of super-sized resequencing targets from the human genome.从人类基因组中富集超大重测序目标。
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Targeted next-generation sequencing by specific capture of multiple genomic loci using low-volume microfluidic DNA arrays.使用低容量微流控DNA阵列通过对多个基因组位点的特异性捕获进行靶向新一代测序。
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Hybrid selection of discrete genomic intervals on custom-designed microarrays for massively parallel sequencing.用于大规模平行测序的定制微阵列上离散基因组区间的混合选择
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Improving the efficiency of genomic loci capture using oligonucleotide arrays for high throughput resequencing.利用寡核苷酸阵列提高基因组基因座捕获效率,实现高通量重测序。
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