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新种土壤诺卡氏菌,从土壤中分离得到。

Nocardioides terrigena sp. nov., isolated from soil.

作者信息

Yoon Jung-Hoon, Kang So-Jung, Lee Soo-Young, Oh Tae-Kwang

机构信息

Korea Research Institute of Bioscience and Biotechnology (KRIBB), PO Box 115, Yusong, Taejon, Korea.

出版信息

Int J Syst Evol Microbiol. 2007 Nov;57(Pt 11):2472-2475. doi: 10.1099/ijs.0.65079-0.

Abstract

A Gram-positive, rod- or coccoid-shaped bacterial strain, DS-17T, was isolated from a soil in Dokdo, Korea, and its taxonomic position was investigated by using a polyphasic approach. Strain DS-17T grew optimally at around pH 8.0 and 30 degrees C in the presence of 0.5-1.0% (w/v) NaCl. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain DS-17T belonged to the genus Nocardioides. The chemotaxonomic properties of strain DS-17T were consistent with those of the genus Nocardioides: the cell-wall peptidoglycan type was based on ll-2,6-diaminopimelic acid, MK-8(H4) was the predominant menaquinone and iso-C16:0, C17:1omega8c and C17:0 were the major fatty acids. The DNA G+C content was 71.5 mol%. Strain DS-17T exhibited 16S rRNA gene sequence similarity values of 94.5-96.9% to the type strains of recognized Nocardioides species. Strain DS-17T could be distinguished from recognized Nocardioides species by differences in phenotypic characteristics. On the basis of phenotypic, chemotaxonomic and phylogenetic data, strain DS-17T is considered to represent a novel species of the genus Nocardioides, for which the name Nocardioides terrigena sp. nov. is proposed. The type strain is DS-17T (=KCTC 19217T=JCM 14582T).

摘要

从韩国独岛的土壤中分离出一株革兰氏阳性、杆状或球状的细菌菌株DS-17T,并采用多相分类法研究其分类地位。菌株DS-17T在pH 8.0左右、30℃以及0.5-1.0%(w/v)NaCl存在的条件下生长最佳。基于16S rRNA基因序列的系统发育分析表明,菌株DS-17T属于诺卡氏菌属。菌株DS-17T的化学分类学特性与诺卡氏菌属一致:细胞壁肽聚糖类型基于ll-2,6-二氨基庚二酸,MK-8(H4)是主要的甲基萘醌,异-C16:0、C17:1ω8c和C17:0是主要脂肪酸。DNA G+C含量为71.5 mol%。菌株DS-17T与已确认的诺卡氏菌属模式菌株的16S rRNA基因序列相似性值为94.5-96.9%。菌株DS-17T可通过表型特征的差异与已确认的诺卡氏菌属物种区分开来。基于表型、化学分类学和系统发育数据,菌株DS-17T被认为代表诺卡氏菌属的一个新物种,为此提出新名称诺卡氏菌陆生菌(Nocardioides terrigena sp. nov.)。模式菌株为DS-17T(=KCTC 19217T=JCM 14582T)。

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