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用于抗可卡因治疗的酶突变体的合理设计。

Rational design of an enzyme mutant for anti-cocaine therapeutics.

作者信息

Zheng Fang, Zhan Chang-Guo

机构信息

Department of Pharmaceutical Sciences, College of Pharmacy, University of Kentucky, 725 Rose Street, Lexington, KY, 40536, USA.

出版信息

J Comput Aided Mol Des. 2008 Sep;22(9):661-71. doi: 10.1007/s10822-007-9144-9. Epub 2007 Nov 8.

DOI:10.1007/s10822-007-9144-9
PMID:17989928
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2875689/
Abstract

(-)-Cocaine is a widely abused drug and there is no available anti-cocaine therapeutic. The disastrous medical and social consequences of cocaine addiction have made the development of an effective pharmacological treatment a high priority. An ideal anti-cocaine medication would be to accelerate (-)-cocaine metabolism producing biologically inactive metabolites. The main metabolic pathway of cocaine in body is the hydrolysis at its benzoyl ester group. Reviewed in this article is the state-of-the-art computational design of high-activity mutants of human butyrylcholinesterase (BChE) against (-)-cocaine. The computational design of BChE mutants have been based on not only the structure of the enzyme, but also the detailed catalytic mechanisms for BChE-catalyzed hydrolysis of (-)-cocaine and (+)-cocaine. Computational studies of the detailed catalytic mechanisms and the structure-and-mechanism-based computational design have been carried out through the combined use of a variety of state-of-the-art techniques of molecular modeling. By using the computational insights into the catalytic mechanisms, a recently developed unique computational design strategy based on the simulation of the rate-determining transition state has been employed to design high-activity mutants of human BChE for hydrolysis of (-)-cocaine, leading to the exciting discovery of BChE mutants with a considerably improved catalytic efficiency against (-)-cocaine. One of the discovered BChE mutants (i.e., A199S/S287G/A328W/Y332G) has a approximately 456-fold improved catalytic efficiency against (-)-cocaine. The encouraging outcome of the computational design and discovery effort demonstrates that the unique computational design approach based on the transition-state simulation is promising for rational enzyme redesign and drug discovery.

摘要

(-)-可卡因是一种被广泛滥用的药物,目前尚无有效的抗可卡因治疗方法。可卡因成瘾带来的灾难性医学和社会后果使得开发有效的药物治疗成为当务之急。理想的抗可卡因药物应该是加速(-)-可卡因代谢,产生无生物活性的代谢产物。可卡因在体内的主要代谢途径是其苯甲酰酯基团的水解。本文综述了针对(-)-可卡因的人丁酰胆碱酯酶(BChE)高活性突变体的最新计算设计。BChE突变体的计算设计不仅基于酶的结构,还基于BChE催化(-)-可卡因和(+)-可卡因水解的详细催化机制。通过结合使用各种先进的分子模拟技术,对详细催化机制以及基于结构和机制的计算设计进行了计算研究。利用对催化机制的计算见解,采用了一种基于速率决定过渡态模拟的最新独特计算设计策略,来设计用于水解(-)-可卡因的人BChE高活性突变体,从而令人兴奋地发现了对(-)-可卡因催化效率有显著提高的BChE突变体。发现的一个BChE突变体(即A199S/S287G/A328W/Y332G)对(-)-可卡因的催化效率提高了约456倍。计算设计和发现工作的令人鼓舞的结果表明,基于过渡态模拟的独特计算设计方法在合理的酶重新设计和药物发现方面具有前景。

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1
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Drugs. 2007;67(3):435-55. doi: 10.2165/00003495-200767030-00007.
2
Modeling effects of oxyanion hole on the ester hydrolysis catalyzed by human cholinesterases.模拟氧阴离子空穴对人胆碱酯酶催化酯水解的影响。
J Phys Chem B. 2005 Dec 8;109(48):23070-6. doi: 10.1021/jp053736x.
3
Molecular dynamics simulation of cocaine binding with human butyrylcholinesterase and its mutants.可卡因与人丁酰胆碱酯酶及其突变体结合的分子动力学模拟
J Phys Chem B. 2005 Mar 17;109(10):4776-82. doi: 10.1021/jp0447136.
4
Computational design of a human butyrylcholinesterase mutant for accelerating cocaine hydrolysis based on the transition-state simulation.基于过渡态模拟的用于加速可卡因水解的人丁酰胆碱酯酶突变体的计算设计。
Angew Chem Int Ed Engl. 2006 Jan 16;45(4):653-7. doi: 10.1002/anie.200503025.
5
Catalytic mechanism and energy barriers for butyrylcholinesterase-catalyzed hydrolysis of cocaine.丁酰胆碱酯酶催化可卡因水解的催化机制和能垒。
Biophys J. 2005 Dec;89(6):3863-72. doi: 10.1529/biophysj.105.070276.
6
Modeling evolution of hydrogen bonding and stabilization of transition states in the process of cocaine hydrolysis catalyzed by human butyrylcholinesterase.人丁酰胆碱酯酶催化可卡因水解过程中氢键的演变及过渡态稳定性的建模
Proteins. 2006 Jan 1;62(1):99-110. doi: 10.1002/prot.20713.
7
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8
Toward cocaine esterase therapeutics.迈向可卡因酯酶疗法。
J Am Chem Soc. 2005 Jul 20;127(28):10016-7. doi: 10.1021/ja053086a.
9
Evaluation of the anticocaine monoclonal antibody GNC92H2 as an immunotherapy for cocaine overdose.评估抗可卡因单克隆抗体GNC92H2作为可卡因过量免疫疗法的效果。
Pharmacol Biochem Behav. 2005 Aug;81(4):709-14. doi: 10.1016/j.pbb.2005.04.018.
10
Bacteriophage-mediated protein delivery into the central nervous system and its application in immunopharmacotherapy.噬菌体介导的蛋白质向中枢神经系统的递送及其在免疫药物治疗中的应用。
Expert Opin Biol Ther. 2005 Jun;5(6):773-81. doi: 10.1517/14712598.5.6.773.