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药物银行:一个关于药物、药物作用和药物靶点的知识库。

DrugBank: a knowledgebase for drugs, drug actions and drug targets.

作者信息

Wishart David S, Knox Craig, Guo An Chi, Cheng Dean, Shrivastava Savita, Tzur Dan, Gautam Bijaya, Hassanali Murtaza

机构信息

Department of Computing Science, University of Alberta, Edmonton, AB, Canada T6G 2E8.

出版信息

Nucleic Acids Res. 2008 Jan;36(Database issue):D901-6. doi: 10.1093/nar/gkm958. Epub 2007 Nov 29.

DOI:10.1093/nar/gkm958
PMID:18048412
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2238889/
Abstract

DrugBank is a richly annotated resource that combines detailed drug data with comprehensive drug target and drug action information. Since its first release in 2006, DrugBank has been widely used to facilitate in silico drug target discovery, drug design, drug docking or screening, drug metabolism prediction, drug interaction prediction and general pharmaceutical education. The latest version of DrugBank (release 2.0) has been expanded significantly over the previous release. With approximately 4900 drug entries, it now contains 60% more FDA-approved small molecule and biotech drugs including 10% more 'experimental' drugs. Significantly, more protein target data has also been added to the database, with the latest version of DrugBank containing three times as many non-redundant protein or drug target sequences as before (1565 versus 524). Each DrugCard entry now contains more than 100 data fields with half of the information being devoted to drug/chemical data and the other half devoted to pharmacological, pharmacogenomic and molecular biological data. A number of new data fields, including food-drug interactions, drug-drug interactions and experimental ADME data have been added in response to numerous user requests. DrugBank has also significantly improved the power and simplicity of its structure query and text query searches. DrugBank is available at http://www.drugbank.ca.

摘要

药物银行是一个注释丰富的资源库,它将详细的药物数据与全面的药物靶点和药物作用信息相结合。自2006年首次发布以来,药物银行已被广泛用于促进计算机辅助药物靶点发现、药物设计、药物对接或筛选、药物代谢预测、药物相互作用预测以及一般药学教育。药物银行的最新版本(2.0版)相比上一版本有了显著扩展。它拥有约4900条药物记录,目前包含的FDA批准的小分子和生物技术药物比之前多60%,其中“实验性”药物多10%。值得注意的是,数据库中还增加了更多的蛋白质靶点数据,药物银行的最新版本包含的非冗余蛋白质或药物靶点序列是之前的三倍(1565个对524个)。现在每个药物卡片条目包含100多个数据字段,其中一半信息用于药物/化学数据,另一半用于药理、药物基因组学和分子生物学数据。应众多用户请求,增加了一些新的数据字段,包括食物-药物相互作用、药物-药物相互作用和实验性药物代谢动力学数据。药物银行还显著提高了其结构查询和文本查询搜索的功能和简易性。可通过http://www.drugbank.ca访问药物银行。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa5d/2238889/100d27ebba9f/gkm958f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa5d/2238889/100d27ebba9f/gkm958f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa5d/2238889/100d27ebba9f/gkm958f1.jpg

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