Dastager Syed G, Lee Jae-Chan, Ju Yoon-Jung, Park Dong-Jin, Kim Chang-Jin
Functional Metabolomics Research Center, KRIBB, Daejeon, Korea.
Antonie Van Leeuwenhoek. 2008 May;93(4):401-6. doi: 10.1007/s10482-007-9217-8. Epub 2007 Dec 11.
A novel actinobacterium designated as MSL-26(T) was isolated from soil in Bigeum Island Korea. A polyphasic study was undertaken to establish the taxonomic position of isolate MSL-26(T). Strain MSL-26(T) was found to have chemical and morphological characteristics similar to Nocardioides. The strain grew optimally at pH 7.5 and 28 degrees C. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain MSL-26(T) forms a distinct line of descent within the radiation enclosed by the genus Nocardioides. The cell wall of strain MSL-26(T) contained LL-2, 6-diaminopimelic acid. The principal menaquinone was MK-8 (H(4)). The phospholipids detected were diphosphatidylglycerol, phosphatidylglycerol and some unidentified lipids. C(18:1) w7c (50.38%) was the major fatty acid. The DNA G + C content of strain MSL-26(T) was 71.4 mol%. The 16S rRNA gene sequence of strain MSL-26(T) shares the highest sequence similarity with Nocardioides kribbensis KCTC 19038(T) (95.78%) and Nocardioides aquaticus DSM 11439(T) (95.52%). Based on the morphological, physiological, biochemical and chemotaxonomical data presented in this study, strain MSL-26(T) should be classified as a novel species, for which the name Nocardioides islandiensis sp. nov. is proposed. The type strain is MSL-26(T) (=KCTC 19275(T)=DSM 19321(T)).
从韩国比格姆岛的土壤中分离出一株新的放线菌,命名为MSL-26(T)。开展了多相研究以确定分离株MSL-26(T)的分类地位。发现菌株MSL-26(T)具有与诺卡氏菌属相似的化学和形态特征。该菌株在pH 7.5和28℃条件下生长最佳。基于16S rRNA基因序列的系统发育分析表明,菌株MSL-26(T)在诺卡氏菌属所涵盖的谱系中形成了一个独特的分支。菌株MSL-26(T)的细胞壁含有LL-2,6-二氨基庚二酸。主要的甲基萘醌是MK-8(H4)。检测到的磷脂为双磷脂酰甘油、磷脂酰甘油和一些未鉴定的脂质。C18:1 ω7c(50.38%)是主要脂肪酸。菌株MSL-26(T)的DNA G + C含量为71.4 mol%。菌株MSL-26(T)的16S rRNA基因序列与克氏诺卡氏菌KCTC 19038(T)(95.78%)和水生诺卡氏菌DSM 11439(T)(95.52%)的序列相似性最高。基于本研究提供的形态、生理、生化和化学分类学数据,菌株MSL-26(T)应被分类为一个新物种,并提议将其命名为冰岛诺卡氏菌(Nocardioides islandiensis sp. nov.)。模式菌株为MSL-26(T)(=KCTC 19275(T)=DSM 19321(T))。