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Non-coding MicroRNAs hsa-let-7g and hsa-miR-181b are Associated with Chemoresponse to S-1 in Colon Cancer.非编码微小RNA hsa-let-7g和hsa-miR-181b与结肠癌对S-1的化疗反应相关。
Cancer Genomics Proteomics. 2006 Oct;3(5):317-324.
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Prognostic Values of microRNAs in Colorectal Cancer.微小RNA在结直肠癌中的预后价值
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Regulatory circuit of human microRNA biogenesis.人类微小RNA生物合成的调控回路。
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Improving the prediction of human microRNA target genes by using ensemble algorithm.利用集成算法改进人类微小RNA靶基因的预测
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Quantitative technologies establish a novel microRNA profile of chronic lymphocytic leukemia.定量技术建立了慢性淋巴细胞白血病的新型微小RNA谱。
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MicroTar: predicting microRNA targets from RNA duplexes.MicroTar:从RNA双链体预测微小RNA靶标。
BMC Bioinformatics. 2006 Dec 18;7 Suppl 5(Suppl 5):S20. doi: 10.1186/1471-2105-7-S5-S20.
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Transcripts targeted by the microRNA-16 family cooperatively regulate cell cycle progression.微小RNA-16家族靶向的转录本协同调节细胞周期进程。
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Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans.大规模测序揭示了秀丽隐杆线虫中的21U-RNA以及其他微小RNA和内源性小干扰RNA。
Cell. 2006 Dec 15;127(6):1193-207. doi: 10.1016/j.cell.2006.10.040.
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miRGen: a database for the study of animal microRNA genomic organization and function.miRGen:一个用于研究动物微小RNA基因组组织与功能的数据库。
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A guide through present computational approaches for the identification of mammalian microRNA targets.哺乳动物微小RNA靶标的当前计算识别方法指南。
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利用生物信息学工具研究微小RNA生物学及其在结直肠癌中的作用——c-Myc和p53与微小RNA的调控关系

Investigation of miRNA biology by bioinformatic tools and impact of miRNAs in colorectal cancer--regulatory relationship of c-Myc and p53 with miRNAs.

作者信息

Xi Yaguang, Edwards John R, Ju Jingfang

机构信息

Cancer Genomics Laboratory, Mitchell Cancer Institute, University of South Alabama, Mobile, AL 36688, USA.

出版信息

Cancer Inform. 2007 May 31;3:245-53.

PMID:18079974
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2133370/
Abstract

MicroRNAs (miRNAs) are a class of small non-coding RNAs that mediate gene expression at the posttranscriptional and translational levels and have been demonstrated to be involved in diverse biological functions. Mounting evidence in recent years has shown that miRNAs play key roles in tumorigenesis due to abnormal expression of and mutations in miRNAs. High throughput miRNA expression profiling of several major tumor types has identified miRNAs associated with clinical diagnosis and prognosis of cancer treatment. Previously our group has discovered a novel regulatory relationship between tumor suppressor gene p53 with miRNAs expression and a number of miRNA promoters contain putative p53 binding sites. In addition, others have reported that c-myc can mediate a large number of miRNAs expression. In this review, we will emphasize algorithms to identify mRNA targets of miRNAs and the roles of miRNAs in colorectal cancer. In particular, we will discuss a novel regulatory relationship of miRNAs with tumor suppressor p53 and c-myc. miRNAs are becoming promising novel targets and biomarkers for future cancer therapeutic development and clinical molecular diagnosis.

摘要

微小RNA(miRNA)是一类小的非编码RNA,它们在转录后和翻译水平介导基因表达,并已被证明参与多种生物学功能。近年来越来越多的证据表明,由于miRNA的异常表达和突变,miRNA在肿瘤发生中起关键作用。对几种主要肿瘤类型的高通量miRNA表达谱分析已经鉴定出与癌症治疗的临床诊断和预后相关的miRNA。此前我们小组发现了肿瘤抑制基因p53与miRNA表达之间的一种新的调控关系,并且许多miRNA启动子含有假定的p53结合位点。此外,其他人报道c-myc可以介导大量miRNA的表达。在这篇综述中,我们将重点介绍鉴定miRNA的mRNA靶标的算法以及miRNA在结直肠癌中的作用。特别是,我们将讨论miRNA与肿瘤抑制因子p53和c-myc的一种新的调控关系。miRNA正成为未来癌症治疗发展和临床分子诊断中很有前景的新靶点和生物标志物。