Yamamoto Atsushi, Iwata Tatsuya, Tokutomi Satoru, Kandori Hideki
Department of Materials Science and Engineering, Nagoya Institute of Technology, Showa-ku, Nagoya 466-8555, Japan.
Biochemistry. 2008 Jan 22;47(3):922-8. doi: 10.1021/bi701851v. Epub 2007 Dec 29.
Phototropin (phot) is a blue-light sensor protein that elicits several photo responses in plants. Phototropin has two flavin mononucleotide (FMN)-binding domains, LOV1 and LOV2, in its N-terminal half. The C-terminal half is a blue-light-regulated Ser/Thr kinase. Various functional studies have reported that only LOV2 is responsible for the kinase activity, whereas the X-ray crystallographic structures of the LOV1 and LOV2 domains are almost identical. How does such a functional difference emerge? Our previous FTIR study of the LOV domains of Adiantum neochrome1 (neo1) showed that light-induced protein structural changes are small and temperature independent for neo1-LOV1, whereas the structural changes are large and highly temperature dependent for neo1-LOV2, which involve loops, alpha-helices, and beta-sheets. These observations successfully explained the different functions in terms of protein structural changes. They also suggested the presence of some crucial amino acids responsible for greater protein structural changes in the LOV2 domain. Here, we focused on phenylalanine-1010 (Phe1010) in neo1-LOV2, where FMN is sandwiched between Phe1010 and the reactive cysteine. Phenylalanine at this position is conserved for LOV2 domains, while the corresponding amino acid is leucine for LOV1 domains in almost all plant phototropins. We observed that unlike wild-type LOV2, the FTIR spectra of F1010L LOV2 exhibited no temperature dependence in the alpha-helical and beta-sheet regions and that spectral changes in amide-I of these regions were significantly reduced, which was similar to LOV1. Thus, the replacement of phenylalanine with leucine converts neo1-LOV2 into neo1-LOV1 in terms of protein structural changes that must be related to the different functions. We will discuss the roles of phenylalanine and leucine in the LOV2 and LOV1 domains, respectively.
向光素(phot)是一种蓝光感应蛋白,可引发植物中的多种光反应。向光素在其N端的一半区域有两个黄素单核苷酸(FMN)结合结构域,即LOV1和LOV2。C端的一半区域是一个蓝光调节的丝氨酸/苏氨酸激酶。各种功能研究报告称,只有LOV2负责激酶活性,而LOV1和LOV2结构域的X射线晶体结构几乎相同。这种功能差异是如何出现的呢?我们之前对铁线蕨新色素1(neo1)的LOV结构域进行的傅里叶变换红外光谱(FTIR)研究表明,光诱导的蛋白结构变化对于neo1-LOV1来说很小且与温度无关,而对于neo1-LOV2来说结构变化很大且高度依赖温度,这些变化涉及环、α螺旋和β折叠。这些观察结果成功地从蛋白结构变化的角度解释了不同的功能。它们还表明在LOV2结构域中存在一些关键氨基酸,这些氨基酸导致了更大的蛋白结构变化。在这里,我们聚焦于neo1-LOV2中的苯丙氨酸-1010(Phe1010),在该位置FMN夹在Phe1010和反应性半胱氨酸之间。在几乎所有植物向光素中,这个位置的苯丙氨酸在LOV2结构域中是保守的,而LOV1结构域的相应氨基酸是亮氨酸。我们观察到,与野生型LOV2不同,F1010L LOV2的FTIR光谱在α螺旋和β折叠区域没有温度依赖性,并且这些区域酰胺-I的光谱变化显著减少,这与LOV1相似。因此,就必须与不同功能相关的蛋白结构变化而言,用亮氨酸取代苯丙氨酸可将neo1-LOV2转变为neo1-LOV1。我们将分别讨论苯丙氨酸和亮氨酸在LOV2和LOV1结构域中的作用。