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源于韩国龙浦湿地的新属新种江原寡糖杆菌。

Uliginosibacterium gangwonense gen. nov., sp. nov., isolated from a wetland, Yongneup, in Korea.

作者信息

Weon Hang-Yeon, Kim Byung-Yong, Yoo Seung-Hee, Kwon Soon-Wo, Go Seung-Joo, Stackebrandt Erko

机构信息

Applied Microbiology Division, National Institute of Agricultural Science and Technology, Rural Development Administration (RDA), Suwon 441-707, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2008 Jan;58(Pt 1):131-5. doi: 10.1099/ijs.0.64567-0.

Abstract

A yellow-pigmented, Gram-negative, aerobic bacterial strain, designated 5YN10-9(T), was isolated from a wetland, Yongneup, of the Inje region, Korea. Cells were motile by means of one polar flagellum. Based on 16S rRNA gene sequence analyses, strain 5YN10-9(T) was shown to be related to the genera Azoarcus, Azovibrio, Thauera and Zoogloea, showing moderate sequence similarities of 90.2-93.3, 92.7, 90.9-93.3 and 92.4-92.6% to members of these genera, respectively. Its distinct phylogenetic position and the low 16S rRNA gene sequence similarity values toward the closest related genera support the inclusion of this novel isolate in a new genus. The major isoprenoid quinone was ubiquinone 8 (Q-8). The predominant cellular fatty acids were C(16:0) and summed feature 3 (comprising C(16:1)omega7c and/or iso-C(15:0) 2-OH). The DNA G+C content was 59.3 mol%. The results of phenotypic, chemotaxonomic and phylogenetic analyses indicate that strain 5YN10-9(T) represents a novel species of a new genus within the family Rhodocyclaceae, class Betaproteobacteria, for which the name Uliginosibacterium gangwonense gen. nov., sp. nov. is proposed. The type strain is 5YN10-9(T) (=KACC 11603(T)=DSM 18521(T)).

摘要

从韩国麟蹄郡龙内浦湿地分离出一株黄色色素、革兰氏阴性、需氧细菌菌株,命名为5YN10-9(T)。细胞通过一根极生鞭毛运动。基于16S rRNA基因序列分析,菌株5YN10-9(T)显示与固氮弧菌属、偶氮弧菌属、陶厄氏菌属和动胶菌属相关,与这些属成员的16S rRNA基因序列相似性分别为90.2 - 93.3%、92.7%、90.9 - 93.3%和92.4 - 92.6%,呈中等相似性。其独特的系统发育位置以及与最密切相关属的低16S rRNA基因序列相似性值支持将这一新分离株归入一个新属。主要类异戊二烯醌为泛醌8(Q-8)。主要细胞脂肪酸为C(16:0)和总和特征3(包括C(16:1)ω7c和/或异-C(15:0) 2-OH)。DNA G+C含量为59.3 mol%。表型、化学分类和系统发育分析结果表明,菌株5YN10-9(T)代表红环菌科、β-变形菌纲内一个新属的一个新物种,为此提出新属名为江原寡养菌属(Uliginosibacterium),新种名为江原寡养菌(Uliginosibacterium gangwonense)。模式菌株为5YN10-9(T)(=KACC 11603(T)=DSM 18521(T))。

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