Microbial Research Division, Honam National Institute of Biological Resources, 99 Gohadoan-gil, Mokpo, Republic of Korea.
Department of Biological Sciences and Bioengineering, Inha University, Incheon, 22212, Republic of Korea.
Curr Microbiol. 2021 Sep;78(9):3381-3387. doi: 10.1007/s00284-021-02605-7. Epub 2021 Jul 8.
A Gram-stain-negative, aerobic, chemoheterotrophic, rod-shaped bacterium motile by a polar flagellum, designated IMCC34675, was isolated from Chungju Lake, an artificial freshwater reservoir in Republic of Korea. The 16S rRNA gene sequence analysis indicated that strain IMCC34675 belongs to the genus Uliginosibacterium, sharing ≤ 97.1% sequence similarities with the type strains of the genus. Whole genome sequencing of strain IMCC34675 revealed a 4.1 Mbp of genome size with 62.4% of the DNA G + C content. The IMCC34675 genome shared 73.3% of average nucleotide identity and 19.9% of digital DNA-DNA hybridization values to the genome of Uliginosibacterium gangwonense DSM 18521, the type species of the genus. The major fatty acids of strain IMCC34675 were summed feature 3 (comprising Cω6c and/or Cω7c) and C. The respiratory quinone detected in the strains was ubiquinone-8 (Q-8). The major polar lipids were phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, one unidentified aminophospholipid, one aminolipid, and five unidentified lipids. Based on the phylogenetic and phenotypic characterization, strain IMCC34675 was considered to represent a novel species within the genus Uliginosibacterium, for which the name Uliginosibacterium aquaticum sp. nov. is proposed with IMCC34675 (= KACC 21758 = NBRC 114418) as the type strain.
一株革兰氏阴性、需氧、化能异养、杆状、通过极生鞭毛运动的细菌,被命名为 IMCC34675,从韩国人工淡水水库忠州湖分离得到。16S rRNA 基因序列分析表明,菌株 IMCC34675 属于 Uliginosibacterium 属,与属的模式种的序列相似度≤97.1%。对菌株 IMCC34675 的全基因组测序显示,其基因组大小为 4.1 Mbp,DNA G+C 含量为 62.4%。IMCC34675 基因组与 Uliginosibacterium gangwonense DSM 18521(属的模式种)的基因组共享 73.3%的平均核苷酸同一性和 19.9%的数字 DNA-DNA 杂交值。菌株 IMCC34675 的主要脂肪酸为 summed feature 3(包括 Cω6c 和/或 Cω7c)和 C16:0。菌株中检测到的呼吸醌为泛醌-8(Q-8)。主要极性脂为磷脂酰乙醇胺、磷脂酰甘油、双磷脂酰甘油、一种未鉴定的氨基磷脂、一种氨基脂和五种未鉴定的脂类。基于系统发育和表型特征,菌株 IMCC34675 被认为代表 Uliginosibacterium 属中的一个新种,因此提议将其命名为水生 Uliginosibacterium 新种,其模式菌株为 IMCC34675(=KACC 21758=NRBC 114418)。