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海岛鞘氨醇单胞菌新种,从土壤中分离得到。

Sphingomonas insulae sp. nov., isolated from soil.

作者信息

Yoon Jung-Hoon, Kang So-Jung, Lee Soo-Young, Oh Tae-Kwang

机构信息

Korea Research Institute of Bioscience and Biotechnology (KRIBB), PO Box 115, Yusong, Taejon, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2008 Jan;58(Pt 1):231-6. doi: 10.1099/ijs.0.65075-0.

Abstract

A Gram-negative, motile and rod-shaped Sphingomonas-like bacterial strain, DS-28(T), was isolated from the soil of Dokdo, Korea, and was subjected to a polyphasic taxonomic study. It grew optimally at around pH 6.5 and 25 degrees C in the presence of 0-0.5% NaCl. It contained Q-10 as the predominant ubiquinone and C(18:1)omega7c, C(14:0) 2-OH and C(16:0) as the major fatty acids. Major polar lipids were sphingoglycolipid, phosphatidylcholine, phosphatidylglycerol and phosphatidylethanolamine. The DNA G+C content was 67.0 mol%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain DS-28(T) belonged to the genus Sphingomonas. Levels of 16S rRNA gene sequence similarity between strain DS-28(T) and the type strains of Sphingomonas species were in the range 93.3-98.3%. DNA-DNA relatedness data and differential phenotypic properties, together with the phylogenetic distinctiveness, demonstrated that strain DS-28(T) is distinguishable from recognized Sphingomonas species. On the basis of phenotypic, phylogenetic and genetic data, strain DS-28(T) represents a novel species of the genus Sphingomonas, for which the name Sphingomonas insulae sp. nov. is proposed. The type strain is DS-28(T) (=KCTC 12872(T)=JCM 14603(T)).

摘要

从韩国独岛的土壤中分离出一株革兰氏阴性、具运动性的杆状鞘氨醇单胞菌属样细菌菌株DS-28(T),并对其进行了多相分类研究。该菌株在pH值约为6.5、温度25℃、NaCl含量为0 - 0.5%的条件下生长最佳。它以Q-10作为主要泛醌,以C(18:1)ω7c、C(14:0) 2-OH和C(16:0)作为主要脂肪酸。主要极性脂为鞘糖脂、磷脂酰胆碱、磷脂酰甘油和磷脂酰乙醇胺。DNA的G+C含量为67.0 mol%。基于16S rRNA基因序列的系统发育分析表明,菌株DS-28(T)属于鞘氨醇单胞菌属。菌株DS-28(T)与鞘氨醇单胞菌属各模式菌株的16S rRNA基因序列相似性水平在93.3 - 98.3%之间。DNA - DNA相关性数据、不同的表型特征以及系统发育独特性表明,菌株DS-28(T)可与已认可的鞘氨醇单胞菌属物种区分开来。基于表型、系统发育和遗传数据,菌株DS-28(T)代表鞘氨醇单胞菌属的一个新物种,为此提出新名称鞘氨醇单胞菌岛栖种(Sphingomonas insulae sp. nov.)。模式菌株为DS-28(T)(=KCTC 12872(T)=JCM 14603(T))。

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