Bar Maya, Scherf Tali, Fass Deborah
Department of Structural Biology, Weizmann Institute of Science, Rehovot 76100, Israel.
Protein Eng Des Sel. 2008 Feb;21(2):107-14. doi: 10.1093/protein/gzm070. Epub 2008 Jan 24.
We tested a disulfide-rich antifreeze protein as a potential scaffold for design or selection of proteins with the capability of binding periodically organized surfaces. The natural antifreeze protein is a beta-helix with a strikingly regular two-dimensional grid of threonine side chains on its ice-binding face. Amino acid substitutions were made on this face to replace blocks of native threonines with other amino acids spanning the range of beta-sheet propensities. The variants, displaying arrays of distinct functional groups, were studied by mass spectrometry, reversed-phase high performance liquid chromatography, thiol reactivity and circular dichroism and NMR spectroscopies to assess their structures and stabilities relative to wild type. The mutants are well expressed in bacteria, despite the potential for mis-folding inherent in these 84-residue proteins with 16 cysteines. We demonstrate that most of the mutants essentially retain the native fold. This disulfide bonded beta-helical scaffold, thermally stable and remarkably tolerant of amino acid substitutions, is therefore useful for design and engineering of macromolecules with the potential to bind various targeted ordered material surfaces.
我们测试了一种富含二硫键的抗冻蛋白,将其作为一种潜在的支架,用于设计或筛选具有结合周期性有序表面能力的蛋白质。天然抗冻蛋白是一种β-螺旋结构,在其冰结合面上具有由苏氨酸侧链构成的极其规则的二维网格。在该表面进行氨基酸替换,用具有不同β-折叠倾向的其他氨基酸取代天然苏氨酸块。通过质谱、反相高效液相色谱、硫醇反应性以及圆二色光谱和核磁共振光谱对显示不同功能基团阵列的变体进行研究,以评估它们相对于野生型的结构和稳定性。尽管这些含有16个半胱氨酸的84个残基的蛋白质存在潜在的错误折叠可能性,但突变体在细菌中仍能良好表达。我们证明大多数突变体基本保留了天然折叠结构。因此,这种具有二硫键的β-螺旋支架具有热稳定性且对氨基酸替换具有显著耐受性,可用于设计和工程化具有结合各种目标有序材料表面潜力的大分子。