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与Moby 1.0的互操作性——这可比共用牙刷好多了!

Interoperability with Moby 1.0--it's better than sharing your toothbrush!

作者信息

Wilkinson Mark D, Senger Martin, Kawas Edward, Bruskiewich Richard, Gouzy Jerome, Noirot Celine, Bardou Philippe, Ng Ambrose, Haase Dirk, Saiz Enrique de Andres, Wang Dennis, Gibbons Frank, Gordon Paul M K, Sensen Christoph W, Carrasco Jose Manuel Rodriguez, Fernández José M, Shen Lixin, Links Matthew, Ng Michael, Opushneva Nina, Neerincx Pieter B T, Leunissen Jack A M, Ernst Rebecca, Twigger Simon, Usadel Bjorn, Good Benjamin, Wong Yan, Stein Lincoln, Crosby William, Karlsson Johan, Royo Romina, Párraga Iván, Ramírez Sergio, Gelpi Josep Lluis, Trelles Oswaldo, Pisano David G, Jimenez Natalia, Kerhornou Arnaud, Rosset Roman, Zamacola Leire, Tarraga Joaquin, Huerta-Cepas Jaime, Carazo Jose María, Dopazo Joaquin, Guigo Roderic, Navarro Arcadi, Orozco Modesto, Valencia Alfonso, Claros M Gonzalo, Pérez Antonio J, Aldana Jose, Rojano M Mar, Fernandez-Santa Cruz Raul, Navas Ismael, Schiltz Gary, Farmer Andrew, Gessler Damian, Schoof Heiko, Groscurth Andreas

出版信息

Brief Bioinform. 2008 May;9(3):220-31. doi: 10.1093/bib/bbn003. Epub 2008 Jan 31.

DOI:10.1093/bib/bbn003
PMID:18238804
Abstract

The BioMoby project was initiated in 2001 from within the model organism database community. It aimed to standardize methodologies to facilitate information exchange and access to analytical resources, using a consensus driven approach. Six years later, the BioMoby development community is pleased to announce the release of the 1.0 version of the interoperability framework, registry Application Programming Interface and supporting Perl and Java code-bases. Together, these provide interoperable access to over 1400 bioinformatics resources worldwide through the BioMoby platform, and this number continues to grow. Here we highlight and discuss the features of BioMoby that make it distinct from other Semantic Web Service and interoperability initiatives, and that have been instrumental to its deployment and use by a wide community of bioinformatics service providers. The standard, client software, and supporting code libraries are all freely available at http://www.biomoby.org/.

摘要

生物莫比项目于2001年在模式生物数据库社区内部启动。它旨在采用一种由共识驱动的方法,规范方法以促进信息交换和对分析资源的访问。六年后,生物莫比开发社区欣然宣布发布互操作性框架、注册应用程序编程接口以及支持的Perl和Java代码库的1.0版本。这些共同通过生物莫比平台提供对全球1400多种生物信息学资源的可互操作访问,并且这个数字还在不断增长。在这里,我们重点介绍并讨论生物莫比的特点,这些特点使其有别于其他语义网服务和互操作性计划,并且对其被广大生物信息学服务提供商群体部署和使用起到了重要作用。标准、客户端软件和支持代码库均可在http://www.biomoby.org/免费获取。

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