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本文引用的文献

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Kinetics of oxidation of the bound cytochromes in reaction centers from Rhodopseudomonas viridis.绿菌视紫红质反应中心结合细胞色素的氧化动力学。
Photosynth Res. 1987 Jan;12(2):165-80. doi: 10.1007/BF00047946.
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Structure of the protein subunits in the photosynthetic reaction centre of Rhodopseudomonas viridis at 3Å resolution.光合反应中心的蛋白质亚基在 3Å 分辨率下的结构。
Nature. 1985;318(6047):618-24. doi: 10.1038/318618a0.
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The Photosynthetic Reaction Center from the Purple Bacterium Rhodopseudomonas viridis.来自绿硫菌的光合反应中心。
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Protein dynamics control the kinetics of initial electron transfer in photosynthesis.蛋白质动力学控制光合作用中初始电子转移的动力学。
Science. 2007 May 4;316(5825):747-50. doi: 10.1126/science.1140030.
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Biochemistry. Photosynthesis from the protein's perspective.生物化学。从蛋白质角度看光合作用。
Science. 2007 May 4;316(5825):703-4. doi: 10.1126/science.1142330.
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Structural, dynamic, and energetic aspects of long-range electron transfer in photosynthetic reaction centers.光合反应中心中长程电子转移的结构、动力学和能量学方面
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Charge recombination and protein dynamics in bacterial photosynthetic reaction centers entrapped in a sol-gel matrix.被困于溶胶-凝胶基质中的细菌光合反应中心中的电荷复合与蛋白质动力学。
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Coupling of nuclear wavepacket motion and charge separation in bacterial reaction centers.细菌反应中心中核波包运动与电荷分离的耦合
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Photosynthetic electron transfer controlled by protein relaxation: analysis by Langevin stochastic approach.由蛋白质弛豫控制的光合电子转移:基于朗之万随机方法的分析
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Proton and electron transfer in bacterial reaction centers.细菌反应中心中的质子和电子转移。
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嗜硫红假单胞菌光合反应中心中电子转移的蛋白质动力学控制

Protein dynamics control of electron transfer in photosynthetic reaction centers from Rps. sulfoviridis.

作者信息

Medvedev E S, Kotelnikov A I, Barinov A V, Psikha B L, Ortega J M, Popović D M, Stuchebrukhov A A

机构信息

The Institute of Problems of Chemical Physics, Russian Academy of Sciences, 142432 Chernogolovka, Russia.

出版信息

J Phys Chem B. 2008 Mar 13;112(10):3208-16. doi: 10.1021/jp709924w. Epub 2008 Feb 20.

DOI:10.1021/jp709924w
PMID:18284231
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2855845/
Abstract

In the cycle of photosynthetic reaction centers, the initially oxidized special pair of bacteriochlorophyll molecules is subsequently reduced by an electron transferred over a chain of four hemes of the complex. Here, we examine the kinetics of electron transfer between the proximal heme c-559 of the chain and the oxidized special pair in the reaction center from Rps. sulfoviridis in the range of temperatures from 294 to 40 K. The experimental data were obtained for three redox states of the reaction center, in which one, two, or three nearest hemes of the chain are reduced prior to special pair oxidation. The experimental kinetic data are analyzed in terms of a Sumi-Marcus-type model developed in our previous paper,1 in which similar measurements were reported on the reaction centers from Rps. viridis. The model allows us to establish a connection between the observed nonexponential electron-transfer kinetics and the local structural relaxation dynamics of the reaction center protein on the microsecond time scale. The activation energy for relaxation dynamics of the protein medium has been found to be around 0.1 eV for all three redox states, which is in contrast to a value around 0.4-0.6 eV in Rps. viridis.1 The possible nature of the difference between the reaction centers from Rps. viridis and Rps. sulfoviridis, which are believed to be very similar, is discussed. The role of the protein glass transition at low temperatures and that of internal water molecules in the process are analyzed.

摘要

在光合反应中心的循环过程中,最初被氧化的特殊对细菌叶绿素分子随后会被通过复合物中四个血红素链转移的电子还原。在此,我们研究了在294至40 K温度范围内,来自嗜硫红假单胞菌(Rps. sulfoviridis)反应中心中链近端血红素c-559与氧化的特殊对之间的电子转移动力学。实验数据是针对反应中心的三种氧化还原状态获得的,在特殊对氧化之前,链上的一个、两个或三个最近的血红素被还原。根据我们之前论文中开发的Sumi-Marcus型模型对实验动力学数据进行了分析,在该论文中报道了对来自绿红假单胞菌(Rps. viridis)反应中心的类似测量。该模型使我们能够在微秒时间尺度上建立观察到的非指数电子转移动力学与反应中心蛋白质的局部结构弛豫动力学之间的联系。已发现蛋白质介质弛豫动力学的活化能对于所有三种氧化还原状态均约为0.1 eV,这与绿红假单胞菌中约0.4 - 0.6 eV的值形成对比。讨论了被认为非常相似的绿红假单胞菌和嗜硫红假单胞菌反应中心之间差异的可能性质。分析了低温下蛋白质玻璃化转变以及内部水分子在此过程中的作用。