• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

G蛋白偶联受体(GPCR)建模中的网络资源

Internet resources in GPCR modelling.

作者信息

Saxena A K, Alam I, Dixit A, Saxena M

机构信息

Division of Medicinal and Process Chemistry, Central Drug Research Institute Chattar Manzil Palace, Lucknow, India.

出版信息

SAR QSAR Environ Res. 2008 Jan-Mar;19(1-2):11-25. doi: 10.1080/10629360701844126.

DOI:10.1080/10629360701844126
PMID:18311631
Abstract

G-Protein coupled receptors (GPCRs), one of the most important families of drug targets, belong to the super family of integral membrane proteins characterized by seven transmembrane helices. Because they are difficult to crystallize, the three dimensional structure of these receptors have not yet been determined by X-ray crystallography, except one. In the absence of a 3-D structure, in-silico approaches for solving the structure of this class of proteins are widely used and provide valuable information for structure based drug design. There are several web servers and computer programs available that automate the modelling process of GPCRs. Some of these include Modeller, Swiss-Model server, Homer, etc. Using these tools reliable homology models of human histamine H1 receptor (HRH1) and thrombin receptor (PAR-1) have been generated which explain the binding mode of the standard antagonists of these receptors and may be useful in designing their novel antagonists.

摘要

G蛋白偶联受体(GPCRs)是最重要的药物靶点家族之一,属于以七个跨膜螺旋为特征的整合膜蛋白超家族。由于它们难以结晶,除了一种受体外,这些受体的三维结构尚未通过X射线晶体学确定。在缺乏三维结构的情况下,用于解决这类蛋白质结构的计算机模拟方法被广泛使用,并为基于结构的药物设计提供了有价值的信息。有几个网络服务器和计算机程序可用于自动进行GPCRs的建模过程。其中一些包括Modeller、Swiss-Model服务器、Homer等。使用这些工具已经生成了人组胺H1受体(HRH1)和凝血酶受体(PAR-1)可靠的同源模型,这些模型解释了这些受体标准拮抗剂的结合模式,可能有助于设计它们的新型拮抗剂。

相似文献

1
Internet resources in GPCR modelling.G蛋白偶联受体(GPCR)建模中的网络资源
SAR QSAR Environ Res. 2008 Jan-Mar;19(1-2):11-25. doi: 10.1080/10629360701844126.
2
Protein-based virtual screening of chemical databases. II. Are homology models of G-Protein Coupled Receptors suitable targets?基于蛋白质的化学数据库虚拟筛选。II. G蛋白偶联受体的同源模型是合适的靶点吗?
Proteins. 2003 Jan 1;50(1):5-25. doi: 10.1002/prot.10237.
3
Molecular modelling studies on G protein-coupled receptors: from sequence to structure?G蛋白偶联受体的分子建模研究:从序列到结构?
J Recept Signal Transduct Res. 1999 Jan-Jul;19(1-4):341-53. doi: 10.3109/10799899909036656.
4
GPCR proteomics: mass spectrometric and functional analysis of histamine H1 receptor after baculovirus-driven and in vitro cell free expression.
J Proteome Res. 2008 Feb;7(2):621-9. doi: 10.1021/pr7005654.
5
Recognition of privileged structures by G-protein coupled receptors.G蛋白偶联受体对特殊结构的识别。
J Med Chem. 2004 Feb 12;47(4):888-99. doi: 10.1021/jm0309452.
6
High-throughput modeling of human G-protein coupled receptors: amino acid sequence alignment, three-dimensional model building, and receptor library screening.人类G蛋白偶联受体的高通量建模:氨基酸序列比对、三维模型构建及受体文库筛选
J Chem Inf Comput Sci. 2004 May-Jun;44(3):1162-76. doi: 10.1021/ci034181a.
7
Linking agonist binding to histamine H1 receptor activation.将激动剂结合与组胺H1受体激活相联系。
Nat Chem Biol. 2005 Jul;1(2):98-103. doi: 10.1038/nchembio714. Epub 2005 Jun 19.
8
Sequence-derived three-dimensional pharmacophore models for G-protein-coupled receptors and their application in virtual screening.基于序列的G蛋白偶联受体三维药效团模型及其在虚拟筛选中的应用。
J Med Chem. 2009 May 14;52(9):2923-32. doi: 10.1021/jm9001346.
9
GLIDA: GPCR-ligand database for chemical genomic drug discovery.GLIDA:用于化学基因组药物发现的GPCR配体数据库。
Nucleic Acids Res. 2006 Jan 1;34(Database issue):D673-7. doi: 10.1093/nar/gkj028.
10
PREDICT modeling and in-silico screening for G-protein coupled receptors.针对G蛋白偶联受体的PREDICT建模与计算机模拟筛选
Proteins. 2004 Oct 1;57(1):51-86. doi: 10.1002/prot.20195.

引用本文的文献

1
2mit, an intronic gene of Drosophila melanogaster timeless2, is involved in behavioral plasticity.果蝇 timeless2 的内含子基因 2mit 参与行为可塑性。
PLoS One. 2013 Sep 30;8(9):e76351. doi: 10.1371/journal.pone.0076351. eCollection 2013.
2
Differences in PAR-2 activating potential by king crab (Paralithodes camtschaticus), salmon (Salmo salar), and bovine (Bos taurus) trypsin.帝王蟹(堪察加拟石蟹)、鲑鱼(大西洋鲑)和牛(黄牛)胰蛋白酶激活PAR-2的潜力差异。
BMC Res Notes. 2013 Jul 20;6:281. doi: 10.1186/1756-0500-6-281.
3
MEDELLER: homology-based coordinate generation for membrane proteins.
梅德勒:基于同源性的膜蛋白坐标生成。
Bioinformatics. 2010 Nov 15;26(22):2833-40. doi: 10.1093/bioinformatics/btq554. Epub 2010 Oct 5.