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M121SeM和C112SeC天青蛋白中蓝色铜位点的光谱和密度泛函理论研究:铜-硒与铜-硫键合

Spectroscopic and density functional theory studies of the blue-copper site in M121SeM and C112SeC azurin: Cu-Se versus Cu-S bonding.

作者信息

Sarangi Ritimukta, Gorelsky Serge I, Basumallick Lipika, Hwang Hee Jung, Pratt Russell C, Stack T Daniel P, Lu Yi, Hodgson Keith O, Hedman Britt, Solomon Edward I

机构信息

Department of Chemistry, Stanford University, Stanford, California 94305, USA.

出版信息

J Am Chem Soc. 2008 Mar 26;130(12):3866-77. doi: 10.1021/ja076495a. Epub 2008 Mar 4.

Abstract

S K-edge X-ray absorption, UV-vis absorption, magnetic circular dichroism (MCD), and resonance Raman spectroscopies are used to investigate the electronic structure differences among WT, M121SeM, and C112SeC Pseudomonas aeruginosa (P.a) azurin. A comparison of S K-edge XAS of WT and M121SeM azurin and a CuII-thioether model complex shows that the 38% S character in the ground state wave function of the blue-copper (BC) sites solely reflects the Cu-SCys bond. Resonance Raman (rR) data on WT and C112SeC azurin give direct evidence for the kinematic coupling between the Cu-SCys stretch and the cysteine deformation modes in WT azurin, which leads to multiple features in the rR spectrum of the BC site. The UV-vis absorption and MCD data on WT, M121SeM, and C112SeC give very similar C0/D0 ratios, indicating that the C-term MCD intensity mechanism involves Cu-centered spin-orbit coupling (SOC). The spectroscopic data combined with density functional theory (DFT) calculations indicate that SCys and SeCys have similar covalent interactions with Cu at their respective bond lengths of 2.1 and 2.3 A. This reflects the similar electronegativites of S and Se in the thiolate/selenolate ligand fragment and explains the strong spectroscopic similarities between WT and C112SeC azurin.

摘要

利用硫(S)K 边 X 射线吸收、紫外可见吸收、磁圆二色性(MCD)和共振拉曼光谱来研究野生型(WT)、M121SeM 和 C112SeC 铜绿假单胞菌(P.a)天青蛋白之间的电子结构差异。对野生型和 M121SeM 天青蛋白以及铜(II)-硫醚模型配合物的硫 K 边 X 射线吸收精细结构(XAS)进行比较表明,蓝铜(BC)位点基态波函数中 38%的 S 特征仅反映了铜-半胱氨酸(Cu-SCys)键。野生型和 C112SeC 天青蛋白的共振拉曼(rR)数据直接证明了野生型天青蛋白中 Cu-SCys 伸缩振动与半胱氨酸变形模式之间的运动学耦合,这导致了 BC 位点 rR 光谱中的多个特征。野生型、M121SeM 和 C112SeC 的紫外可见吸收和 MCD 数据给出了非常相似的 C0/D0 比值,表明 C 项 MCD 强度机制涉及以铜为中心的自旋轨道耦合(SOC)。光谱数据与密度泛函理论(DFT)计算相结合表明,半胱氨酸(SCys)和硒代半胱氨酸(SeCys)在各自 2.1 和 2.3 Å 的键长处与铜具有相似的共价相互作用。这反映了硫醇盐/硒醇盐配体片段中 S 和 Se 相似的电负性,并解释了野生型和 C112SeC 天青蛋白之间强烈的光谱相似性。

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