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斑马鱼反向遗传学的当前视角:向前迈进

Current perspectives in zebrafish reverse genetics: moving forward.

作者信息

Skromne Isaac, Prince Victoria E

机构信息

Department of Biology, University of Miami, Coral Gables, Florida 33146, USA.

出版信息

Dev Dyn. 2008 Apr;237(4):861-82. doi: 10.1002/dvdy.21484.

DOI:10.1002/dvdy.21484
PMID:18330930
Abstract

Use of the zebrafish as a model of vertebrate development and disease has expanded dramatically over the past decade. While many articles have discussed the strengths of zebrafish forward genetics (the phenotype-driven approach), there has been less emphasis on equally important and frequently used reverse genetics (the candidate gene-driven approach). Here we review both current and prospective reverse genetic techniques that are applicable to the zebrafish model. We include discussion of pharmacological approaches, popular gain-of-function and knockdown approaches, and gene targeting strategies. We consider the need for temporal and spatial control over gain/loss of gene function, and discuss available and developing techniques to achieve this end. Our goal is both to reveal the current technical advantages of the zebrafish and to highlight those areas where work is still required to allow this system to be exploited to full advantage.

摘要

在过去十年中,斑马鱼作为脊椎动物发育和疾病模型的应用急剧增加。虽然许多文章讨论了斑马鱼正向遗传学(表型驱动方法)的优势,但对同样重要且常用的反向遗传学(候选基因驱动方法)的强调较少。在这里,我们综述了适用于斑马鱼模型的当前和未来反向遗传技术。我们讨论了药理学方法、常用的功能获得和敲低方法以及基因靶向策略。我们考虑了对基因功能的获得/丧失进行时空控制的必要性,并讨论了实现这一目标的现有和正在发展的技术。我们的目标既是揭示斑马鱼当前的技术优势,也是突出那些仍需开展工作以使该系统得到充分利用的领域。

相似文献

1
Current perspectives in zebrafish reverse genetics: moving forward.斑马鱼反向遗传学的当前视角:向前迈进
Dev Dyn. 2008 Apr;237(4):861-82. doi: 10.1002/dvdy.21484.
2
Manipulation of gene expression during zebrafish embryonic development using transient approaches.利用瞬时方法在斑马鱼胚胎发育过程中操纵基因表达。
Methods Mol Biol. 2008;469:273-300. doi: 10.1007/978-1-60327-469-2_19.
3
Determination of mRNA and protein expression patterns in zebrafish.斑马鱼中mRNA和蛋白质表达模式的测定。
Methods Mol Biol. 2008;469:253-72. doi: 10.1007/978-1-59745-249_18.
4
Fishing for gene function--endocrine modelling in the zebrafish.探寻基因功能——斑马鱼中的内分泌模型
J Endocrinol. 2006 Jun;189(3):425-39. doi: 10.1677/joe.1.06683.
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Electroporation of DNA, RNA, and morpholinos into zebrafish embryos.将DNA、RNA和吗啉代寡核苷酸电穿孔导入斑马鱼胚胎。
Methods. 2006 Jul;39(3):207-11. doi: 10.1016/j.ymeth.2005.12.009.
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Development of cell cultures with competency for contributing to the zebrafish germ line.具有对斑马鱼生殖系有贡献能力的细胞培养物的开发。
Crit Rev Eukaryot Gene Expr. 2004;14(1-2):43-51.
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Quantitative assessment of the knockdown efficiency of morpholino antisense oligonucleotides in zebrafish embryos using a luciferase assay.利用荧光素酶测定法对斑马鱼胚胎中吗啉代反义寡核苷酸的敲低效率进行定量评估。
Genesis. 2008 Jan;46(1):1-7. doi: 10.1002/dvg.20361.
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Amyloid precursor protein is required for convergent-extension movements during Zebrafish development.淀粉样前体蛋白是斑马鱼发育过程中汇聚延伸运动所必需的。
Dev Biol. 2009 Nov 1;335(1):1-11. doi: 10.1016/j.ydbio.2009.07.041. Epub 2009 Aug 4.
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The zebrafish as a novel system for functional genomics and therapeutic development applications.斑马鱼作为功能基因组学和治疗开发应用的新型系统。
Curr Opin Mol Ther. 2001 Jun;3(3):224-8.
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The lim domain only protein 7 is important in zebrafish heart development.仅含LIM结构域蛋白7在斑马鱼心脏发育中起重要作用。
Dev Dyn. 2008 Dec;237(12):3940-52. doi: 10.1002/dvdy.21807.

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Bypassing Glutamic Acid Decarboxylase 1 (Gad1) Induced Craniofacial Defects with a Photoactivatable Translation Blocker Morpholino.使用光激活翻译阻断剂 Morpholino 绕过谷氨酸脱羧酶 1(Gad1)诱导的颅面缺陷。
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Reduced stability and intracellular transport of dsRNA contribute to poor RNAi response in lepidopteran insects.双链RNA稳定性的降低及其在细胞内的转运,导致鳞翅目昆虫RNA干扰反应不佳。
RNA Biol. 2016 Jul 2;13(7):656-69. doi: 10.1080/15476286.2016.1191728. Epub 2016 May 31.
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The Zebrafish as a Tool to Cancer Drug Discovery.斑马鱼作为癌症药物发现的工具
Austin J Pharmacol Ther. 2015;3(2):1069. Epub 2015 May 4.
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Transcriptional response to cardiac injury in the zebrafish: systematic identification of genes with highly concordant activity across in vivo models.斑马鱼心脏损伤的转录反应:在体内模型中对具有高度一致活性的基因进行系统鉴定。
BMC Genomics. 2014 Oct 3;15(1):852. doi: 10.1186/1471-2164-15-852.
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Anaesthetic tricaine acts preferentially on neural voltage-gated sodium channels and fails to block directly evoked muscle contraction.麻醉用的三卡因优先作用于神经电压门控钠通道,且不能直接阻断诱发的肌肉收缩。
PLoS One. 2014 Aug 4;9(8):e103751. doi: 10.1371/journal.pone.0103751. eCollection 2014.
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Reverse genetic morpholino approach using cardiac ventricular injection to transfect multiple difficult-to-target tissues in the zebrafish larva.利用心脏心室注射的反向遗传吗啉代方法转染斑马鱼幼虫中的多个难以靶向的组织。
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