Ng Felicia, Boucher Shayne, Koh Susie, Sastry Konduru S R, Chase Lucas, Lakshmipathy Uma, Choong Cleo, Yang Zheng, Vemuri Mohan C, Rao Mahendra S, Tanavde Vivek
Genome and Gene Expression Analysis Group, Bioinformatics Institute, Agency for Science Technology and Research (A*STAR), Singapore.
Blood. 2008 Jul 15;112(2):295-307. doi: 10.1182/blood-2007-07-103697. Epub 2008 Mar 10.
We compared the transcriptomes of marrow-derived mesenchymal stem cells (MSCs) with differentiated adipocytes, osteocytes, and chondrocytes derived from these MSCs. Using global gene-expression profiling arrays to detect RNA transcripts, we have identified markers that are specific for MSCs and their differentiated progeny. Further, we have also identified pathways that MSCs use to differentiate into adipogenic, chondrogenic, and osteogenic lineages. We identified activin-mediated transforming growth factor (TGF)-beta signaling, platelet-derived growth factor (PDGF) signaling and fibroblast growth factor (FGF) signaling as the key pathways involved in MSC differentiation. The differentiation of MSCs into these lineages is affected when these pathways are perturbed by inhibitors of cell surface receptor function. Since growth and differentiation are tightly linked processes, we also examined the importance of these 3 pathways in MSC growth. These 3 pathways were necessary and sufficient for MSC growth. Inhibiting any of these pathways slowed MSC growth, whereas a combination of TGF-beta, PDGF, and beta-FGF was sufficient to grow MSCs in a serum-free medium up to 5 passages. Thus, this study illustrates it is possible to predict signaling pathways active in cellular differentiation and growth using microarray data and experimentally verify these predictions.
我们比较了骨髓间充质干细胞(MSC)与源自这些MSC的分化脂肪细胞、骨细胞和软骨细胞的转录组。利用全基因组表达谱阵列来检测RNA转录本,我们鉴定出了对MSC及其分化后代具有特异性的标志物。此外,我们还确定了MSC分化为脂肪生成、软骨生成和成骨谱系所使用的途径。我们确定激活素介导的转化生长因子(TGF)-β信号传导、血小板衍生生长因子(PDGF)信号传导和成纤维细胞生长因子(FGF)信号传导是参与MSC分化的关键途径。当这些途径受到细胞表面受体功能抑制剂的干扰时,MSC向这些谱系的分化会受到影响。由于生长和分化是紧密相连的过程,我们还研究了这3条途径在MSC生长中的重要性。这3条途径对MSC生长是必要且充分的。抑制这些途径中的任何一条都会减缓MSC的生长,而TGF-β、PDGF和β-FGF的组合足以在无血清培养基中使MSC生长多达5代。因此,本研究表明利用微阵列数据预测细胞分化和生长中活跃的信号通路并通过实验验证这些预测是可行的。