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蚯蚓 Eisenia fetida 中黑索今(RDX)和三硝基甲苯(TNT)交互亚致死效应的转录组学分析

Transcriptomic analysis of RDX and TNT interactive sublethal effects in the earthworm Eisenia fetida.

作者信息

Gong Ping, Guan Xin, Inouye Laura S, Deng Youping, Pirooznia Mehdi, Perkins Edward J

机构信息

SpecPro Inc, 3909 Halls Ferry Road, Vicksburg, MS 39180, USA.

出版信息

BMC Genomics. 2008;9 Suppl 1(Suppl 1):S15. doi: 10.1186/1471-2164-9-S1-S15.

Abstract

BACKGROUND

Explosive compounds such as TNT and RDX are recalcitrant contaminants often found co-existing in the environment. In order to understand the joint effects of TNT and RDX on earthworms, an important ecological and bioindicator species at the molecular level, we sampled worms (Eisenia fetida) exposed singly or jointly to TNT (50 mg/kg soil) and RDX (30 mg/kg soil) for 28 days and profiled gene expression in an interwoven loop designed microarray experiment using a 4k-cDNA array. Lethality, growth and reproductive endpoints were measured.

RESULTS

Sublethal doses of TNT and RDX had no significant effects on the survival and growth of earthworms, but significantly reduced cocoon and juvenile counts. The mixture exhibited more pronounced reproductive toxicity than each single compound, suggesting an additive interaction between the two compounds. In comparison with the controls, we identified 321 differentially expressed transcripts in TNT treated worms, 32 in RDX treated worms, and only 6 in mixture treated worms. Of the 329 unique differentially expressed transcripts, 294 were affected only by TNT, 24 were common to both TNT and RDX treatments, and 3 were common to all treatments. The reduced effects on gene expression in the mixture exposure suggest that RDX might interact in an antagonistic manner with TNT at the gene expression level. The disagreement between gene expression and reproduction results may be attributed to sampling time, absence of known reproduction-related genes, and lack of functional information for many differentially expressed transcripts. A gene potentially related to reproduction (echinonectin) was significantly depressed in TNT or RDX exposed worms and may be linked to reduced fecundity.

CONCLUSIONS

Sublethal doses of TNT and RDX affected many biological pathways from innate immune response to oogenesis, leading to reduced reproduction without affecting survival and growth. A complex interaction between mixtures of RDX and TNT was observed at the gene expression level that requires further study of the dynamics of gene expression and reproductive activities in E. fetida. These efforts will be essential to gain an understanding of the additive reproductive toxicity between RDX and TNT.

摘要

背景

三硝基甲苯(TNT)和黑索今(RDX)等爆炸物是环境中常见的顽固性污染物。为了在分子水平上了解TNT和RDX对蚯蚓(一种重要的生态和生物指示物种)的联合影响,我们采集了单独或联合暴露于TNT(50毫克/千克土壤)和RDX(30毫克/千克土壤)28天的蚯蚓(赤子爱胜蚓)样本,并在使用4k-cDNA阵列的交织环设计微阵列实验中分析基因表达情况。同时测量了致死率、生长和繁殖终点指标。

结果

亚致死剂量的TNT和RDX对蚯蚓的存活和生长没有显著影响,但显著减少了茧和幼蚓数量。混合物表现出比单一化合物更明显的生殖毒性,表明这两种化合物之间存在相加作用。与对照组相比,我们在TNT处理的蚯蚓中鉴定出321个差异表达转录本,在RDX处理的蚯蚓中鉴定出32个,在混合物处理的蚯蚓中仅鉴定出6个。在329个独特的差异表达转录本中,294个仅受TNT影响,24个在TNT和RDX处理中都有,3个在所有处理中都有。混合物暴露对基因表达的影响减弱表明,RDX可能在基因表达水平上与TNT发生拮抗作用。基因表达和繁殖结果之间的不一致可能归因于采样时间、缺乏已知的繁殖相关基因以及许多差异表达转录本缺乏功能信息。一个可能与繁殖相关的基因(棘皮粘连蛋白)在暴露于TNT或RDX的蚯蚓中显著下调,可能与繁殖力降低有关。

结论

亚致死剂量的TNT和RDX影响了从先天免疫反应到卵子发生的许多生物学途径,导致繁殖减少但不影响存活和生长。在基因表达水平上观察到RDX和TNT混合物之间存在复杂的相互作用,这需要进一步研究赤子爱胜蚓基因表达和生殖活动的动态变化。这些工作对于理解RDX和TNT之间的相加生殖毒性至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c98d/2386057/5b9691cd66a6/1471-2164-9-S1-S15-1.jpg

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