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基于实验和理论电荷密度的两性离子L-丙氨酸和DL-丙氨酸晶体的物理化学性质

Physicochemical properties of zwitterionic L- and DL-alanine crystals from their experimental and theoretical charge densities.

作者信息

Destro Riccardo, Soave Raffaella, Barzaghi Mario

机构信息

Dipartimento di Chimica Fisica ed Elettrochimica, Università di Milano, Via Golgi 19, 20133 Milano, Italy.

出版信息

J Phys Chem B. 2008 Apr 24;112(16):5163-74. doi: 10.1021/jp710496q. Epub 2008 Mar 29.

DOI:10.1021/jp710496q
PMID:18373373
Abstract

The total experimental electron density distributions rho(r) of zwitterionic L- and DL-alanine crystals, as derived from extensive sets of X-ray diffracted intensities collected at 23 and 19 K, are compared to gain an insight into the different physical properties of the two related chiral compounds in the solid state and to explore the extent of the rho(r) transferability. Relevant parameters that characterize the two crystal forms are obtained, showing differences and similarities in terms of (i) geometric descriptors, (ii) topological indexes, (iii) molecular electrostatic potential Phi(r) distributions, (iv) atomic volumes and charges, (v) molecular electric moments, and (vi) electrostatic interaction energies. To assess the relative stability of the racemate with respect to the pure enantiomer, the crystal lattice energies, as obtained through DFT fully periodic calculations, are also discussed and compared with the experimental sublimation enthalpies after correction for the proton-transfer energies. In-crystal group charges, evaluated with the quantum theory of atoms in molecules, are found to be transferable between the racemic and the pure enantiomer, at variance with group volumes. Similarly, molecular first and third moments are not strictly transferable and indicate that for the zwitterionic alanine molecule the molecular charge distribution in the DL-crystal is more polarized in the c direction by about 10%. By contrast, quantitative agreement is observed for second and fourth moments. Significant differences arise from (1) the crystal packing of the dipole vectors, which are aligned in an antiparallel fashion in the L-crystal, to be compared with a parallel alignment in the racemate, due the polar space group Pna21 of the latter, (2) the strongly attractive electrostatic energy of a homochiral pair in the L-crystal, which is opposed to the corresponding heterochiral pair in the DL-crystal form. The difference between these Ees values amounts to 135-150 kJ mol(-1). Despite this, the two crystal forms are predicted as equally thermodynamically favored by the theoretical P-B3LYP estimates of the crystal lattice energies. Finally, the necessity of an upgrading of the dispersion and exchange-repulsion terms currently adopted within the experimental charge density approach to intermolecular interactions is recognized and discussed.

摘要

通过在23K和19K下收集的大量X射线衍射强度数据得出的两性离子L-丙氨酸和DL-丙氨酸晶体的总实验电子密度分布ρ(r)进行了比较,以深入了解这两种相关手性化合物在固态下的不同物理性质,并探索ρ(r)的可转移性程度。获得了表征两种晶体形式的相关参数,这些参数在以下方面显示出差异和相似性:(i)几何描述符;(ii)拓扑指数;(iii)分子静电势Φ(r)分布;(iv)原子体积和电荷;(v)分子电矩;(vi)静电相互作用能。为了评估外消旋体相对于纯对映体的相对稳定性,还讨论了通过DFT全周期计算获得的晶格能,并与质子转移能校正后的实验升华焓进行了比较。用分子中原子的量子理论评估的晶体内基团电荷在消旋体和纯对映体之间是可转移的,这与基团体积不同。同样,分子的第一和第三矩不是严格可转移的,这表明对于两性离子丙氨酸分子,DL-晶体中的分子电荷分布在c方向上极化程度高约10%。相比之下,第二和第四矩观察到定量一致性。显著差异源于:(1)偶极矢量的晶体堆积,在L-晶体中偶极矢量以反平行方式排列,与外消旋体中的平行排列相比,这是由于后者的极性空间群Pna21;(2)L-晶体中同手性对的强吸引静电能,这与DL-晶体形式中相应的异手性对相反。这些Ees值之间的差异为135 - 150 kJ mol⁻¹。尽管如此,理论上P - B3LYP对晶格能的估计预测这两种晶体形式在热力学上同样有利。最后,认识并讨论了升级目前实验电荷密度方法中用于分子间相互作用的色散和交换排斥项的必要性。

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