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[人类微小病毒的遗传多样性]

[Genetic diversity of human Erythroviruses].

作者信息

Servant-Delmas A, Laperche S, Mercier M, Lefrère J-J

机构信息

Département des agents transmissibles par le sang, Institut national de la transfusion sanguine, 6, rue Alexandre-Cabanel, 75739 Paris cedex 15, France.

出版信息

Pathol Biol (Paris). 2009 Mar;57(2):167-74. doi: 10.1016/j.patbio.2008.02.005. Epub 2008 Apr 2.

Abstract

B19 Parvovirus (B19V) has been considered for a long period of time as the unique human virus belonging to the genus Erythrovirus. The genetic diversity of B19V isolates has been shown to be very low (<2% nucleotide divergence). The isolation of a variant (V9 strain), with a sequence markedly distinct from that of B19V (>13% nucleotide divergence) led to specify the classification of this virus family. Phylogenetic analysis of partial sequences of V9-related isolates combined with Erythrovirus sequences in sequences banks indicates an organization into three well-individualized genotypes. Analysis of the nearly full-length genome sequences show an ancient separation between the three genotypes lineages. Genotype 3 (the most ancient lineage) could have originated in Africa. The functional regions of major proteins are conserved in the three genotypes. The frequency of these genotypes is various according to studies. Genotype 1 is predominant, except in Ghana where all the described isolates were genotype 3. A prospective French study performed between 1999 and 2001 indicated that genotypes 2 and 3 viruses circulated with a significant frequency (10%). Pathogenic properties might not differ according to the genotype.

摘要

长期以来,B19细小病毒(B19V)一直被认为是红细胞病毒属中唯一的人类病毒。研究表明,B19V分离株的遗传多样性非常低(核苷酸差异<2%)。一种变异株(V9株)被分离出来,其序列与B19V的序列明显不同(核苷酸差异>13%),这使得该病毒家族的分类得以明确。对与V9相关的分离株的部分序列以及序列库中的红细胞病毒序列进行系统发育分析,结果表明该病毒可分为三个特征明显的基因型。对近乎全长的基因组序列分析显示,这三个基因型谱系之间存在古老的分化。基因型3(最古老的谱系)可能起源于非洲。主要蛋白的功能区在这三个基因型中是保守的。根据研究,这些基因型的出现频率各不相同。基因型1占主导地位,但在加纳,所有已描述的分离株均为基因型3。一项于1999年至2001年在法国开展的前瞻性研究表明,基因型2和3的病毒具有相当高的传播频率(10%)。不同基因型的致病特性可能并无差异。

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