Newman Stuart A, Bhat Ramray
Department of Cell Biology and Anatomy, New York Medical College, Valhalla, NY 10595, USA.
Phys Biol. 2008 Apr 10;5(1):015008. doi: 10.1088/1478-3975/5/1/015008.
The shapes and forms of multicellular organisms arise by the generation of new cell states and types and changes in the numbers and rearrangements of the various kinds of cells. While morphogenesis and pattern formation in all animal species are widely recognized to be mediated by the gene products of an evolutionarily conserved 'developmental-genetic toolkit', the link between these molecular players and the physics underlying these processes has been generally ignored. This paper introduces the concept of 'dynamical patterning modules' (DPMs), units consisting of one or more products of the 'toolkit' genes that mobilize physical processes characteristic of chemically and mechanically excitable meso- to macroscopic systems such as cell aggregates: cohesion, viscoelasticity, diffusion, spatiotemporal heterogeneity based on lateral inhibition and multistable and oscillatory dynamics. We suggest that ancient toolkit gene products, most predating the emergence of multicellularity, assumed novel morphogenetic functions due to change in the scale and context inherent to multicellularity. We show that DPMs, acting individually and in concert with each other, constitute a 'pattern language' capable of generating all metazoan body plans and organ forms. The physical dimension of developmental causation implies that multicellular forms during the explosive radiation of animal body plans in the middle Cambrian, approximately 530 million years ago, could have explored an extensive morphospace without concomitant genotypic change or selection for adaptation. The morphologically plastic body plans and organ forms generated by DPMs, and their ontogenetic trajectories, would subsequently have been stabilized and consolidated by natural selection and genetic drift. This perspective also solves the apparent 'molecular homology-analogy paradox', whereby widely divergent modern animal types utilize the same molecular toolkit during development by proposing, in contrast to the Neo-Darwinian principle, that phenotypic disparity early in evolution occurred in advance of, rather than closely tracked, genotypic change.
多细胞生物的形状和形态是通过产生新的细胞状态和类型以及各种细胞数量的变化和重排而形成的。虽然所有动物物种的形态发生和模式形成被广泛认为是由进化上保守的“发育遗传工具包”的基因产物介导的,但这些分子参与者与这些过程背后的物理学之间的联系通常被忽视了。本文介绍了“动态模式模块”(DPMs)的概念,这些单元由“工具包”基因的一个或多个产物组成,它们调动化学和机械可兴奋的中观到宏观系统(如细胞聚集体)特有的物理过程:内聚力、粘弹性、扩散、基于侧向抑制的时空异质性以及多稳态和振荡动力学。我们认为,大多数在多细胞性出现之前就存在的古老工具包基因产物,由于多细胞性所固有的规模和背景的变化,承担了新的形态发生功能。我们表明,DPMs单独或相互协同作用,构成了一种能够产生所有后生动物身体结构和器官形态的“模式语言”。发育因果关系的物理维度意味着,在大约5.3亿年前的中寒武世动物身体结构的爆发性辐射期间,多细胞形态可以在不伴随基因型变化或适应性选择的情况下探索广阔的形态空间。由DPMs产生的形态可塑性身体结构和器官形态及其个体发育轨迹,随后将通过自然选择和遗传漂变而稳定和巩固。这种观点还解决了明显的“分子同源性 - 类比悖论”,即与新达尔文主义原则相反,通过提出进化早期的表型差异发生在基因型变化之前而非紧密跟踪基因型变化,广泛不同的现代动物类型在发育过程中使用相同的分子工具包。