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动态模式模块:一种用于多细胞形态发育与进化的“模式语言”。

Dynamical patterning modules: a "pattern language" for development and evolution of multicellular form.

作者信息

Newman Stuart A, Bhat Ramray

机构信息

Department of Cell Biology and Anatomy, New York Medical College, New York 10595, USA.

出版信息

Int J Dev Biol. 2009;53(5-6):693-705. doi: 10.1387/ijdb.072481sn.

Abstract

This article considers the role played by a core set of "dynamical patterning modules" (DPMs) in the origination, development and evolution of complex organisms. These consist of the products of a subset of the genes of what has come to be known as the "developmental-genetic toolkit" in association with physical processes they mobilize. The physical processes are those characteristic of chemically and mechanically excitable mesoscopic systems like cell aggregates: cohesion, viscoelasticity, diffusion, spatiotemporal heterogeneity based on activator-inhibitor interaction, and multistable and oscillatory dynamics. We focus on the emergence of the Metazoa, and show how toolkit gene products and pathways that pre-existed the metazoans acquired novel morphogenetic functions simply by virtue of the change in scale and context inherent to multicellularity. We propose that DPMs, acting singly and in combination with each other, constitute a "pattern language" capable of generating all metazoan body plans and organ forms. This concept implies that the multicellular organisms of the late Precambrian-early Cambrian were phenotypically plastic, fluently exploring morphospace in a fashion decoupled from both function-based selection and genotypic change. The relatively stable developmental trajectories and morphological phenotypes of modern organisms, then, are considered to be products of stabilizing selection. This perspective solves the apparent "molecular homology-analogy paradox," whereby widely divergent modern animal types utilize the same molecular toolkit during development, but it does so by inverting the neo-Darwinian principle that phenotypic disparity was generated over long periods of time in concert with, and in proportion to genotypic change.

摘要

本文探讨了一组核心的“动态模式模块”(DPMs)在复杂生物体的起源、发育和进化过程中所起的作用。这些模块由一部分基因的产物组成,这些基因来自于后来被称为“发育遗传工具包”的基因集合,并与它们所调动的物理过程相关联。这些物理过程是化学和机械可激发的介观系统(如细胞聚集体)所特有的:内聚性、粘弹性、扩散、基于激活剂-抑制剂相互作用的时空异质性,以及多稳态和振荡动力学。我们聚焦于后生动物的出现,并展示了后生动物之前就已存在的工具包基因产物和途径是如何仅仅凭借多细胞性所固有的规模和环境变化而获得新的形态发生功能的。我们提出,DPMs单独作用以及相互组合,构成了一种能够生成所有后生动物身体结构和器官形态的“模式语言”。这一概念意味着前寒武纪晚期至寒武纪早期的多细胞生物在表型上具有可塑性,能够以一种与基于功能的选择和基因型变化均无关的方式灵活地探索形态空间。那么,现代生物相对稳定的发育轨迹和形态表型被认为是稳定选择的产物。这种观点解决了明显的“分子同源性 - 类比悖论”,即广泛不同的现代动物类型在发育过程中使用相同的分子工具包,但它是通过颠倒新达尔文主义原则来做到这一点的,该原则认为表型差异是在很长一段时间内与基因型变化协同并成比例产生的。

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