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ADAR介导的RNA编辑在新发现靶点中的特异性

Specificity of ADAR-mediated RNA editing in newly identified targets.

作者信息

Riedmann Eva M, Schopoff Sandy, Hartner Jochen C, Jantsch Michael F

机构信息

Department of Chromosome Biology, Max F. Perutz Laboratories, University of Vienna, A-1030 Vienna, Austria.

出版信息

RNA. 2008 Jun;14(6):1110-8. doi: 10.1261/rna.923308. Epub 2008 Apr 22.

Abstract

Adenosine deaminases that act on RNA (ADARs) convert adenosines to inosine in both coding and noncoding double-stranded RNA. Deficiency in either ADAR1 or ADAR2 in mice is incompatible with normal life and development. While the ADAR2 knockout phenotype can be attributed to the lack of editing of the GluR-B receptor, the embryonic lethal phenotype caused by ADAR1 deficiency still awaits clarification. Recently, massive editing was observed in noncoding regions of mRNAs in mice and humans. Moreover, editing was observed in protein-coding regions of four mRNAs encoding FlnA, CyFip2, Blcap, and IGFBP7. Here, we investigate which of the two active mammalian ADAR enzymes is responsible for editing of these RNAs and whether any of them could possibly contribute to the phenotype observed in ADAR knockout mice. Editing of Blcap, FlnA, and some sites within B1 and B2 SINEs clearly depends on ADAR1, while other sites depend on ADAR2. Based on our data, substrate specificities can be further defined for ADAR1 and ADAR2. Future studies on the biological implications associated with a changed editing status of the studied ADAR targets will tell whether one of them turns out to be directly or indirectly responsible for the severe phenotype caused by ADAR1 deficiency.

摘要

作用于RNA的腺苷脱氨酶(ADARs)可将编码和非编码双链RNA中的腺苷转化为肌苷。小鼠中ADAR1或ADAR2的缺失与正常生命和发育不兼容。虽然ADAR2基因敲除表型可归因于GluR - B受体缺乏编辑,但ADAR1缺乏导致的胚胎致死表型仍有待阐明。最近,在小鼠和人类的mRNA非编码区观察到大量编辑。此外,在编码FlnA、CyFip2、Blcap和IGFBP7的四种mRNA的蛋白质编码区也观察到编辑。在此,我们研究两种活性哺乳动物ADAR酶中哪一种负责这些RNA的编辑,以及它们中的任何一种是否可能导致ADAR基因敲除小鼠中观察到的表型。Blcap、FlnA以及B1和B2 SINEs内的一些位点的编辑明显依赖于ADAR1,而其他位点依赖于ADAR2。根据我们的数据,可以进一步确定ADAR1和ADAR2的底物特异性。未来对与所研究的ADAR靶标编辑状态改变相关的生物学意义的研究将揭示它们中的一种是否直接或间接导致ADAR1缺乏引起的严重表型。

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