Dawson Scott C, Pham Jonathan K, House Susan A, Slawson Elizabeth E, Cronembold Daniela, Cande W Zacheus
Department of Microbiology, 255 Briggs Hall, One Shields Ave,, UC-Davis Davis, CA 95616, USA.
BMC Microbiol. 2008 Apr 29;8:71. doi: 10.1186/1471-2180-8-71.
Diplomonads are common free-living inhabitants of anoxic aquatic environments and are also found as intestinal commensals or parasites of a wide variety of animals. Spironucleus vortens is a putatively commensal diplomonad of angelfish that grows to high cell densities in axenic culture. Genomic sequencing of S. vortens is in progress, yet little information is available regarding molecular and cellular aspects of S. vortens biology beyond descriptive ultrastructural studies. To facilitate the development of S. vortens as an additional diplomonad experimental model, we have constructed and stably transformed an episomal plasmid containing an enhanced green fluorescent protein (GFP) tag, an AU1 epitope tag, and a tandem affinity purification (TAP) tag. This construct also contains selectable antibiotic resistance markers for both S. vortens and E. coli.
Stable transformants of S. vortens grew relatively rapidly (within 7 days) after electroporation and were maintained under puromycin selection for over 6 months. We expressed the enhanced GFP variant, eGFP, under transcriptional control of the S. vortens histone H3 promoter, and visually confirmed diffuse GFP expression in over 50% of transformants. Next, we generated a histone H3::GFP fusion using the S. vortens conventional histone H3 gene and its native promoter. This construct was also highly expressed in the majority of S. vortens transformants, in which the H3::GFP fusion localized to the chromatin in both nuclei. Finally, we used fluorescence in situ hybridization (FISH) of the episomal plasmid to show that the transformed plasmid localized to only one nucleus/cell and was present at roughly 10-20 copies per nucleus. Because S. vortens grows to high densities in laboratory culture, it is a feasible diplomonad from which to purify native protein complexes. Thus, we also included a TAP tag in the plasmid constructs to permit future tagging and subsequent purification of protein complexes by affinity chromatography via a two-step purification procedure.
Currently, progress in protistan functional and comparative genomics is hampered by the lack of free-living or commensal protists in axenic culture, as well as a lack of molecular genetic tools with which to study protein function in these organisms. This stable transformation protocol combined with the forthcoming genome sequence allows Spironucleus vortens to serve as a new experimental model for cell biological studies and for comparatively assessing protein functions in related diplomonads such as the human intestinal parasite, Giardia intestinalis.
双滴虫是缺氧水生环境中常见的自由生活生物,也存在于多种动物的肠道中,作为共生菌或寄生虫。旋核螺旋体是神仙鱼的一种假定共生双滴虫,能在无菌培养中生长至高密度细胞。旋核螺旋体的基因组测序正在进行中,但除了描述性超微结构研究外,关于其生物学分子和细胞方面的信息很少。为了促进旋核螺旋体作为另一种双滴虫实验模型的发展,我们构建并稳定转化了一个附加体质粒,该质粒包含增强型绿色荧光蛋白(GFP)标签、AU1表位标签和串联亲和纯化(TAP)标签。该构建体还包含针对旋核螺旋体和大肠杆菌的可选抗生素抗性标记。
旋核螺旋体的稳定转化体在电穿孔后生长相对较快(7天内),并在嘌呤霉素选择下维持了6个月以上。我们在旋核螺旋体组蛋白H3启动子的转录控制下表达增强型GFP变体eGFP,并在超过50%的转化体中直观地证实了弥漫性GFP表达。接下来,我们使用旋核螺旋体常规组蛋白H3基因及其天然启动子生成了组蛋白H3::GFP融合体。该构建体在大多数旋核螺旋体转化体中也高度表达,其中H3::GFP融合体定位于两个细胞核中的染色质。最后,我们使用附加体质粒的荧光原位杂交(FISH)表明转化质粒仅定位于一个细胞核/细胞,每个细胞核中约有10 - 20个拷贝。由于旋核螺旋体在实验室培养中生长至高密度,它是一种可行的双滴虫,可从中纯化天然蛋白质复合物。因此,我们还在质粒构建体中包含了一个TAP标签,以便将来通过两步纯化程序通过亲和色谱法对蛋白质复合物进行标记和后续纯化。
目前,原生生物功能和比较基因组学的进展受到无菌培养中缺乏自由生活或共生原生生物以及缺乏用于研究这些生物体中蛋白质功能的分子遗传工具的阻碍。这种稳定转化方案与即将公布的基因组序列相结合,使旋核螺旋体能够作为细胞生物学研究以及比较评估相关双滴虫(如人类肠道寄生虫肠贾第虫)中蛋白质功能的新实验模型。