Kim Hyojoong, Lee Seunghwan
Program in Entomology, School of Agricultural Biotechnology and Research Institute for Agriculture and Life Science, Seoul National University, Seoul 151-921, Korea.
Mol Cells. 2008 Jun 30;25(4):510-22. Epub 2008 May 6.
To construct the molecular systematics of the genus Megoura (Hemiptera: Aphididae), DNA based-identifi-cation was performed using four mitochondrial and three nuclear DNA regions: partial cytochrome c oxidase I (COI), partial tRNA-leucine + cytochrome c oxidase II (tRNA/COII), cytochrome b (CytB), partial 12S rRNA + tRNA-valine + 16S rRNA (12S/16S), elongation factor-1 alpha (EF1 alpha), and the internal transcribed spacers 1 and 2 (ITS1, ITS2). Pairwise sequence divergences between taxa were compared, and phylogenetic analyses were performed based on each DNA region separately, and the combined datasets. COI, CytB, EF1 alpha, ITS1, and ITS2 were relatively effective in determining species and resolving their relationships. By contrast, the sequences of tRNA/COII and 12S/16S were not able to separate the closely related species. CytB and EF1alpha gave better resolution with higher average sequence divergences (4.7% for CytB, 5.2% for EF1 alpha). The sequence divergence of COI (3.0%) was moderate, and those of the two ITS regions (1.8% for ITS1, 2.0% for ITS2) were very low. Phylogenetic trees were constructed by minimum evolution, maximum parsimony, maximum likelihood, and Bayesian phylogenetic analyses. The results indicated that the phylogenetic relationships between Megoura species were associated with their host preferences. Megoura brevipilosa and M. lespedezae living on Lespedeza were closely related, and M. nigra, monophagous on Vicia venosa, was rather different from M. crassicauda, M. litoralis, and M. viciae, which are oligophagous on Lathyrus and Vicia. The three populations of M. crassicauda formed a clade separated from M. litoralis and M. viciae. Nevertheless M. litoralis and M. viciae, which are morphologically similar, were not separated due to negligible sequence divergence. We discuss the phylogenetic relationships of the Megoura, and the usefulness of the seven DNA regions for determining the species level phylogeny of aphids.
为构建长管蚜属(半翅目:蚜科)的分子系统学,利用四个线粒体和三个核DNA区域进行基于DNA的鉴定:细胞色素c氧化酶I(COI)部分序列、tRNA-亮氨酸 + 细胞色素c氧化酶II(tRNA/COII)部分序列、细胞色素b(CytB)、12S rRNA + tRNA-缬氨酸 + 16S rRNA(12S/16S)部分序列、延伸因子-1α(EF1α)以及内部转录间隔区1和2(ITS1、ITS2)。比较了分类单元之间的成对序列差异,并分别基于每个DNA区域以及合并数据集进行了系统发育分析。COI、CytB、EF1α、ITS1和ITS2在确定物种及其关系方面相对有效。相比之下,tRNA/COII和12S/16S序列无法区分亲缘关系较近的物种。CytB和EF1α具有更高的平均序列差异(CytB为4.7%,EF1α为5.2%),分辨率更高。COI的序列差异(3.0%)适中,两个ITS区域的序列差异(ITS1为1.8%,ITS2为2.0%)非常低。通过最小进化法、最大简约法、最大似然法和贝叶斯系统发育分析构建了系统发育树。结果表明,长管蚜属物种之间的系统发育关系与其寄主偏好相关。生活在胡枝子上的短毛长管蚜和胡枝子长管蚜亲缘关系密切,而单食性寄生在蚕豆上的黑长管蚜与寡食性寄生在山黧豆和蚕豆上的粗尾长管蚜、海滨长管蚜和豌豆长管蚜差异较大。粗尾长管蚜的三个种群形成了一个与海滨长管蚜和豌豆长管蚜分开的分支。然而,形态相似的海滨长管蚜和豌豆长管蚜由于序列差异可忽略不计而未被区分开来。我们讨论了长管蚜属的系统发育关系,以及这七个DNA区域在确定蚜虫物种水平系统发育方面的实用性。