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Genes2Networks: connecting lists of gene symbols using mammalian protein interactions databases.基因到网络:利用哺乳动物蛋白质相互作用数据库连接基因符号列表
BMC Bioinformatics. 2007 Oct 4;8:372. doi: 10.1186/1471-2105-8-372.
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Protein phosphatase-1 modulates the function of Pax-6, a transcription factor controlling brain and eye development.蛋白磷酸酶-1调节Pax-6的功能,Pax-6是一种控制大脑和眼睛发育的转录因子。
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The endocannabinoid system in targeting inflammatory neurodegenerative diseases.靶向炎症性神经退行性疾病的内源性大麻素系统。
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The emerging functions of endocannabinoid signaling during CNS development.内源性大麻素信号在中枢神经系统发育过程中的新功能。
Trends Pharmacol Sci. 2007 Feb;28(2):83-92. doi: 10.1016/j.tips.2006.12.004. Epub 2007 Jan 10.
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IntAct--open source resource for molecular interaction data.IntAct——分子相互作用数据的开源资源。
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The TGFbeta intracellular effector Smad3 regulates neuronal differentiation and cell fate specification in the developing spinal cord.转化生长因子β细胞内效应分子Smad3调节发育中脊髓的神经元分化和细胞命运特化。
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MINT: the Molecular INTeraction database.MINT:分子相互作用数据库。
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The roles of BRCA1 and BRCA2 and associated proteins in the maintenance of genomic stability.BRCA1和BRCA2以及相关蛋白在维持基因组稳定性中的作用。
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PAX genes: roles in development, pathophysiology, and cancer.PAX基因:在发育、病理生理学及癌症中的作用
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触发神经突生长的大麻素受体信号网络的设计逻辑。

Design logic of a cannabinoid receptor signaling network that triggers neurite outgrowth.

作者信息

Bromberg Kenneth D, Ma'ayan Avi, Neves Susana R, Iyengar Ravi

机构信息

Department of Pharmacology and Systems Therapeutics, Mount Sinai School of Medicine, New York, NY 10029, USA.

出版信息

Science. 2008 May 16;320(5878):903-9. doi: 10.1126/science.1152662.

DOI:10.1126/science.1152662
PMID:18487186
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2776723/
Abstract

Cannabinoid receptor 1 (CB1R) regulates neuronal differentiation. To understand the logic underlying decision-making in the signaling network controlling CB1R-induced neurite outgrowth, we profiled the activation of several hundred transcription factors after cell stimulation. We assembled an in silico signaling network by connecting CB1R to 23 activated transcription factors. Statistical analyses of this network predicted a role for the breast cancer 1 protein BRCA1 in neuronal differentiation and a new pathway from CB1R through phosphoinositol 3-kinase to the transcription factor paired box 6 (PAX6). Both predictions were experimentally confirmed. Results of transcription factor activation experiments that used pharmacological inhibitors of kinases revealed a network organization of partial OR gates regulating kinases stacked above AND gates that control transcription factors, which together allow for distributed decision-making in CB1R-induced neurite outgrowth.

摘要

大麻素受体1(CB1R)调节神经元分化。为了理解控制CB1R诱导的神经突生长的信号网络中决策背后的逻辑,我们分析了细胞刺激后数百种转录因子的激活情况。我们通过将CB1R与23种激活的转录因子相连,构建了一个计算机信号网络。对该网络的统计分析预测乳腺癌1蛋白BRCA1在神经元分化中起作用,以及一条从CB1R通过磷酸肌醇3激酶到转录因子配对盒6(PAX6)的新途径。这两个预测均通过实验得到证实。使用激酶药理学抑制剂的转录因子激活实验结果揭示了一个由部分“或”门调节激酶的网络组织,这些激酶堆叠在控制转录因子的“与”门之上,共同允许在CB1R诱导的神经突生长中进行分布式决策。