• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

原核生物启动子对DNA弯曲和超螺旋响应的常见序列决定因素。

Common sequence determinants of the response of a prokaryotic promoter to DNA bending and supercoiling.

作者信息

Figueroa N, Wills N, Bossi L

机构信息

Centre de Génétique Moléculaire du CNRS, Université P. et M. Curie, Gif-sur-Yvette, France.

出版信息

EMBO J. 1991 Apr;10(4):941-9. doi: 10.1002/j.1460-2075.1991.tb08028.x.

DOI:10.1002/j.1460-2075.1991.tb08028.x
PMID:1849077
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC452738/
Abstract

Inhibiting the activity of DNA gyrase by mutation or by drugs in S. typhimurium causes the loss of transcription attenuation in the histidine operon. We show that gyrase activity is needed to maintain high-level expression of the tRNA(His) gene (hisR), a prerequisite for proper functioning of the attenuation mechanism. A point mutation in the promoter of the tRNA gene cluster which includes the hisR gene, specifically relieves the promoter response to negative supercoiling thereby restoring full hisR transcription (and, in turn, his attenuation) in the presence of a defective gyrase. The very same mutation, a single base-pair substitution between the -10 box and the transcription start site (-7), was found independently among suppressors of the transcriptional deficiency caused by disruption of DNA curvature upstream from the hisR promoter. We show that the -7 change does not lead to a generalized increase of promoter strength; the effects of the mutation are seen only when gyrase is inhibited or the upstream curvature is altered. This suggests that the upstream curvature intervenes in the same initiation step which is sensitive to superhelical tension. Three additional promoter mutations correcting (or alleviating) the effects of the upstream alteration (including a change at -8) are described and discussed.

摘要

在鼠伤寒沙门氏菌中,通过突变或药物抑制DNA促旋酶的活性会导致组氨酸操纵子中转录衰减的丧失。我们发现,促旋酶活性对于维持tRNA(His)基因(hisR)的高水平表达是必需的,而这是衰减机制正常运作的一个前提条件。在包含hisR基因的tRNA基因簇启动子中的一个点突变,可特异性地缓解启动子对负超螺旋的反应,从而在促旋酶有缺陷的情况下恢复hisR的完全转录(进而恢复his衰减)。在hisR启动子上游DNA曲率破坏导致的转录缺陷的抑制子中,独立发现了完全相同的突变,即在-10框与转录起始位点(-7)之间的单个碱基对替换。我们发现,-7处的变化不会导致启动子强度普遍增加;只有在促旋酶受到抑制或上游曲率改变时,才会看到该突变的影响。这表明上游曲率干预了对超螺旋张力敏感的同一起始步骤。还描述并讨论了另外三个校正(或减轻)上游改变影响的启动子突变(包括-8处的一个变化)。

相似文献

1
Common sequence determinants of the response of a prokaryotic promoter to DNA bending and supercoiling.原核生物启动子对DNA弯曲和超螺旋响应的常见序列决定因素。
EMBO J. 1991 Apr;10(4):941-9. doi: 10.1002/j.1460-2075.1991.tb08028.x.
2
The supercoiling sensitivity of a bacterial tRNA promoter parallels its responsiveness to stringent control.细菌tRNA启动子的超螺旋敏感性与其对严格控制的反应性相似。
EMBO J. 1998 Apr 15;17(8):2359-67. doi: 10.1093/emboj/17.8.2359.
3
Mutations causing aminotriazole resistance and temperature sensitivity reside in gyrB, which encodes the B subunit of DNA gyrase.导致对氨基三唑耐药性和温度敏感性的突变存在于gyrB中,gyrB编码DNA促旋酶的B亚基。
J Bacteriol. 1992 Aug;174(16):5479-81. doi: 10.1128/jb.174.16.5479-5481.1992.
4
Rates of gyrase supercoiling and transcription elongation control supercoil density in a bacterial chromosome.拓扑异构酶超螺旋和转录延伸的速率控制细菌染色体的超螺旋密度。
PLoS Genet. 2012;8(8):e1002845. doi: 10.1371/journal.pgen.1002845. Epub 2012 Aug 16.
5
DNA supercoiling and the leu-500 promoter mutation of Salmonella typhimurium.鼠伤寒沙门氏菌的DNA超螺旋与leu-500启动子突变
EMBO J. 1988 Jun;7(6):1863-9. doi: 10.1002/j.1460-2075.1988.tb03019.x.
6
The relative contributions of transcription and translation to plasmid DNA supercoiling in Salmonella typhimurium.转录和翻译对鼠伤寒沙门氏菌中质粒DNA超螺旋的相对贡献。
Mol Microbiol. 1994 Jan;11(1):111-22. doi: 10.1111/j.1365-2958.1994.tb00294.x.
7
RNA polymerase (rpoB) mutants selected for increased resistance to gyrase inhibitors in Salmonella typhimurium.在鼠伤寒沙门氏菌中选择对拓扑异构酶抑制剂具有更高抗性的RNA聚合酶(rpoB)突变体。
Mol Gen Genet. 1995 Jun 25;247(6):680-92. doi: 10.1007/BF00290399.
8
Phenotypic suppression of DNA gyrase deficiencies by a deletion lowering the gene dosage of a major tRNA in Salmonella typhimurium.通过缺失降低鼠伤寒沙门氏菌中一种主要tRNA的基因剂量对DNA回旋酶缺陷进行表型抑制。
J Bacteriol. 1994 Apr;176(8):2216-26. doi: 10.1128/jb.176.8.2216-2226.1994.
9
his operons of Escherichia coli and Salmonella typhimurium are regulated by DNA supercoiling.大肠杆菌和鼠伤寒沙门氏菌的这些操纵子受DNA超螺旋调控。
Proc Natl Acad Sci U S A. 1987 Jan;84(2):517-21. doi: 10.1073/pnas.84.2.517.
10
Multiple mechanisms contribute to osmotic inducibility of proU operon expression in Escherichia coli: demonstration of two osmoresponsive promoters and of a negative regulatory element within the first structural gene.多种机制促成了大肠杆菌中proU操纵子表达的渗透诱导性:两个渗透反应启动子及第一个结构基因内一个负调控元件的证明。
J Bacteriol. 1991 Dec;173(23):7481-90. doi: 10.1128/jb.173.23.7481-7490.1991.

引用本文的文献

1
Transcription-driven DNA supercoiling counteracts H-NS-mediated gene silencing in bacterial chromatin.转录驱动的 DNA 超螺旋抵消了细菌染色质中 H-NS 介导的基因沉默。
Nat Commun. 2024 Mar 30;15(1):2787. doi: 10.1038/s41467-024-47114-w.
2
Manipulation of topoisomerase expression inhibits cell division but not growth and reveals a distinctive promoter structure in Synechocystis.拓扑异构酶表达的调控抑制细胞分裂但不影响生长,并揭示了集胞藻中独特的启动子结构。
Nucleic Acids Res. 2022 Dec 9;50(22):12790-12808. doi: 10.1093/nar/gkac1132.
3
Maintenance of Transcription-Translation Coupling by Elongation Factor P.

本文引用的文献

1
Acetylornithinase of Escherichia coli: partial purification and some properties.大肠杆菌的乙酰鸟氨酸酶:部分纯化及某些性质
J Biol Chem. 1956 Jan;218(1):97-106.
2
Model for regulation of the histidine operon of Salmonella.沙门氏菌组氨酸操纵子调控模型。
Proc Natl Acad Sci U S A. 1980 Jan;77(1):508-12. doi: 10.1073/pnas.77.1.508.
3
Fusion of the Escherichia coli tRNALeu1 promoter to the galK gene: analysis of sequences necessary for growth-rate-dependent regulation.大肠杆菌亮氨酰-tRNA1启动子与半乳糖激酶基因的融合:生长速率依赖性调控所需序列的分析
延伸因子P对转录-翻译偶联的维持
mBio. 2016 Sep 13;7(5):e01373-16. doi: 10.1128/mBio.01373-16.
4
Biosynthesis of Histidine.组氨酸的生物合成
EcoSal Plus. 2009 Aug;3(2). doi: 10.1128/ecosalplus.3.6.1.9.
5
Insertion hot spot for horizontally acquired DNA within a bidirectional small-RNA locus in Salmonella enterica.肠炎沙门氏菌双向小RNA基因座内水平获得性DNA的插入热点。
J Bacteriol. 2008 Jun;190(11):4075-8. doi: 10.1128/JB.00220-08. Epub 2008 Apr 4.
6
Mutation at the "exit gate" of the salmonella gyrase a subunit suppresses a defect in the gyrase B subunit.沙门氏菌gyrase A亚基“出口门”处的突变抑制了gyrase B亚基的缺陷。
J Bacteriol. 2005 Oct;187(19):6841-4. doi: 10.1128/JB.187.19.6841-6844.2005.
7
Axial distortion as a sensor of supercoil changes: a molecular model for the homeostatic regulation of DNA gyrase.作为超螺旋变化传感器的轴向畸变:DNA促旋酶稳态调节的分子模型
J Genet. 2001 Dec;80(3):119-24. doi: 10.1007/BF02717907.
8
The extracytoplasmic sigma factor, final sigma(E), is required for intracellular survival of nontypeable Haemophilus influenzae in J774 macrophages.胞质外sigma因子,即最终的sigma(E),是不可分型流感嗜血杆菌在J774巨噬细胞内生存所必需的。
Infect Immun. 2002 Feb;70(2):708-15. doi: 10.1128/IAI.70.2.708-715.2002.
9
ModE-dependent molybdate regulation of the molybdenum cofactor operon moa in Escherichia coli.大肠杆菌中钼辅因子操纵子moa的钼酸盐调控依赖于ModE。
J Bacteriol. 2000 Dec;182(24):7035-43. doi: 10.1128/JB.182.24.7035-7043.2000.
10
Histidine operon deattenuation in dnaA mutants of Salmonella typhimurium correlates with a decrease in the gene dosage ratio between tRNA(His) and histidine biosynthetic loci.鼠伤寒沙门氏菌dnaA突变体中组氨酸操纵子的去衰减作用与tRNA(His)和组氨酸生物合成基因座之间基因剂量比的降低相关。
J Bacteriol. 1999 May;181(9):2938-41. doi: 10.1128/JB.181.9.2938-2941.1999.
Cell. 1982 Oct;30(3):855-64. doi: 10.1016/0092-8674(82)90290-2.
4
The hisR locus of Salmonella: nucleotide sequence and expression.沙门氏菌的hisR基因座:核苷酸序列与表达
Mol Gen Genet. 1983;192(1-2):163-70. doi: 10.1007/BF00327662.
5
Requirement for an upstream element for optimal transcription of a bacterial tRNA gene.细菌tRNA基因最佳转录对上游元件的需求。
Nature. 1983;305(5931):248-50. doi: 10.1038/305248a0.
6
Functional interrelationship between two tandem E. coli ribosomal RNA promoters.两个串联的大肠杆菌核糖体RNA启动子之间的功能相互关系。
Nature. 1983 Mar 3;302(5903):74-6. doi: 10.1038/302074a0.
7
Conditionally transposition-defective derivative of Mu d1(Amp Lac).Mu d1(Amp Lac)的条件性转座缺陷衍生物
J Bacteriol. 1984 Jul;159(1):130-7. doi: 10.1128/jb.159.1.130-137.1984.
8
Plasmid insertion mutagenesis and lac gene fusion with mini-mu bacteriophage transposons.利用微小噬菌体转座子进行质粒插入诱变和乳糖操纵子基因融合
J Bacteriol. 1984 May;158(2):488-95. doi: 10.1128/jb.158.2.488-495.1984.
9
Plasmid vectors for the selection of promoters.用于启动子选择的质粒载体。
Gene. 1984 Feb;27(2):151-60. doi: 10.1016/0378-1119(84)90136-7.
10
The locus of sequence-directed and protein-induced DNA bending.序列导向和蛋白质诱导的DNA弯曲位点。
Nature. 1984;308(5959):509-13. doi: 10.1038/308509a0.