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深海热液口化学自养生物:多样性、生物化学及生态意义

Deep-sea vent chemoautotrophs: diversity, biochemistry and ecological significance.

作者信息

Nakagawa Satoshi, Takai Ken

机构信息

Subground Animalcule Retrieval Program, Extremobiosphere Research Center, Japan Agency for Marine-Earth Science and Technology, Yokosuka, Japan.

出版信息

FEMS Microbiol Ecol. 2008 Jul;65(1):1-14. doi: 10.1111/j.1574-6941.2008.00502.x. Epub 2008 May 21.

Abstract

Deep-sea vents support productive ecosystems driven primarily by chemoautotrophs. Chemoautotrophs are organisms that are able to fix inorganic carbon using a chemical energy obtained through the oxidation of reduced compounds. Following the discovery of deep-sea vent ecosystems in 1977, there has been an increasing knowledge that deep-sea vent chemoautotrophs display remarkable physiological and phylogenetic diversity. Cultivation-dependent and -independent studies have led to an emerging view that the majority of deep-sea vent chemoautotrophs have the ability to derive energy from a variety of redox couples other than the conventional sulfur-oxygen couple, and fix inorganic carbon via the reductive tricarboxylic acid cycle. In addition, recent genomic, metagenomic and postgenomic studies have considerably accelerated the comprehensive understanding of molecular mechanisms of deep-sea vent chemoautotrophy, even in yet uncultivable endosymbionts of vent fauna. Genomic analysis also suggested that there are previously unrecognized evolutionary links between deep-sea vent chemoautotrophs and important human/animal pathogens. This review summarizes chemoautotrophy in deep-sea vents, highlighting recent biochemical and genomic discoveries.

摘要

深海热液喷口维持着主要由化学自养生物驱动的高产生态系统。化学自养生物是一类能够利用通过氧化还原化合物获得的化学能来固定无机碳的生物。自1977年发现深海热液喷口生态系统以来,人们越来越认识到深海热液喷口化学自养生物表现出显著的生理和系统发育多样性。依赖培养和不依赖培养的研究形成了一种新观点,即大多数深海热液喷口化学自养生物有能力从除传统硫-氧偶联之外的多种氧化还原偶联中获取能量,并通过还原性三羧酸循环固定无机碳。此外,最近的基因组学、宏基因组学和后基因组学研究极大地加速了对深海热液喷口化学自养分子机制的全面理解,甚至在尚未培养的喷口动物内共生体方面也是如此。基因组分析还表明,深海热液喷口化学自养生物与重要的人类/动物病原体之间存在以前未被认识到的进化联系。本综述总结了深海热液喷口中的化学自养现象,突出了最近的生化和基因组学发现。

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