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酶反应中涉及的酶物种的平均寿命和首次通过时间。应用于不稳定酶系统。

Mean lifetime and first-passage time of the enzyme species involved in an enzyme reaction. Application to unstable enzyme systems.

作者信息

Arribas E, Muñoz-Lopez A, Garcia-Meseguer M J, Lopez-Najera A, Avalos L, Garcia-Molina F, Garcia-Moreno M, Varon R

机构信息

Applied Physics Department, University of Castilla-La Mancha, Albacete, Spain.

出版信息

Bull Math Biol. 2008 Jul;70(5):1425-49. doi: 10.1007/s11538-008-9307-4. Epub 2008 May 28.

Abstract

Taking as starting point the complete analysis of mean residence times in linear compartmental systems performed by Garcia-Meseguer et al. (Bull. Math. Biol. 65:279-308, 2003) as well as the fact that enzyme systems, in which the interconversions between the different enzyme species involved are of first or pseudofirst order, act as linear compartmental systems, we hereby carry out a complete analysis of the mean lifetime that the enzyme molecules spend as part of the enzyme species, forms, or groups involved in an enzyme reaction mechanism. The formulas to evaluate these times are given as a function of the individual rate constants and the initial concentrations of the involved species at the onset of the reaction. We apply the results to unstable enzyme systems and support the results by using a concrete example of such systems. The practicality of obtaining the mean times and their possible application in a kinetic data analysis is discussed.

摘要

以Garcia-Meseguer等人(《数学生物学通报》65:279 - 308,2003年)对线性隔室系统中平均驻留时间的完整分析为出发点,以及考虑到在不同酶种类之间的相互转化为一级或准一级的酶系统可作为线性隔室系统这一事实,我们在此对酶分子作为参与酶反应机制的酶种类、形式或基团的一部分所花费的平均寿命进行完整分析。评估这些时间的公式表示为反应开始时各个速率常数和所涉及物种的初始浓度的函数。我们将结果应用于不稳定酶系统,并通过此类系统的一个具体例子来支持这些结果。讨论了获得平均时间的实用性及其在动力学数据分析中的可能应用。

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