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酵母GID复合物,一种参与碳水化合物代谢调节的新型泛素连接酶(E3)。

The yeast GID complex, a novel ubiquitin ligase (E3) involved in the regulation of carbohydrate metabolism.

作者信息

Santt Olivier, Pfirrmann Thorsten, Braun Bernhard, Juretschke Jeannette, Kimmig Philipp, Scheel Hartmut, Hofmann Kay, Thumm Michael, Wolf Dieter H

机构信息

Institut für Biochemie, Universität Stuttgart, 70569 Stuttgart, Germany.

出版信息

Mol Biol Cell. 2008 Aug;19(8):3323-33. doi: 10.1091/mbc.e08-03-0328. Epub 2008 May 28.

DOI:10.1091/mbc.e08-03-0328
PMID:18508925
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2488282/
Abstract

Glucose-dependent regulation of carbon metabolism is a subject of intensive studies. We have previously shown that the switch from gluconeogenesis to glycolysis is associated with ubiquitin-proteasome linked elimination of the key enzyme fructose-1,6-bisphosphatase. Seven glucose induced degradation deficient (Gid)-proteins found previously in a genomic screen were shown to form a complex that binds FBPase. One of the subunits, Gid2/Rmd5, contains a degenerated RING finger domain. In an in vitro assay, heterologous expression of GST-Gid2 leads to polyubiquitination of proteins. In addition, we show that a mutation in the degenerated RING domain of Gid2/Rmd5 abolishes fructose-1,6-bisphosphatase polyubiquitination and elimination in vivo. Six Gid proteins are present in gluconeogenic cells. A seventh protein, Gid4/Vid24, occurs upon glucose addition to gluconeogenic cells and is afterwards eliminated. Forcing abnormal expression of Gid4/Vid24 in gluconeogenic cells leads to fructose-1,6-bisphosphatase degradation. This suggests that Gid4/Vid24 initiates fructose-1,6-bisphosphatase polyubiquitination by the Gid complex and its subsequent elimination by the proteasome. We also show that an additional gluconeogenic enzyme, phosphoenolpyruvate carboxykinase, is subject to Gid complex-dependent degradation. Our study uncovers a new type of ubiquitin ligase complex composed of novel subunits involved in carbohydrate metabolism and identifies Gid4/Vid24 as a major regulator of this E3.

摘要

葡萄糖依赖性碳代谢调节是深入研究的课题。我们之前已经表明,从糖异生向糖酵解的转变与泛素-蛋白酶体介导的关键酶果糖-1,6-二磷酸酶的消除有关。先前在基因组筛选中发现的七种葡萄糖诱导降解缺陷(Gid)蛋白形成了一个与果糖-1,6-二磷酸酶结合的复合物。其中一个亚基Gid2/Rmd5含有一个退化的RING指结构域。在体外试验中,GST-Gid2的异源表达导致蛋白质的多聚泛素化。此外,我们表明Gid2/Rmd5退化RING结构域中的突变消除了果糖-1,6-二磷酸酶在体内的多聚泛素化和消除。六种Gid蛋白存在于糖异生细胞中。第七种蛋白Gid4/Vid24在向糖异生细胞中添加葡萄糖后出现,随后被消除。在糖异生细胞中强制异常表达Gid4/Vid24会导致果糖-1,6-二磷酸酶降解。这表明Gid4/Vid24通过Gid复合物启动果糖-1,6-二磷酸酶的多聚泛素化及其随后被蛋白酶体消除。我们还表明,另一种糖异生酶磷酸烯醇式丙酮酸羧激酶也受到Gid复合物依赖性降解的影响。我们的研究揭示了一种新型的泛素连接酶复合物,其由参与碳水化合物代谢的新型亚基组成,并将Gid4/Vid24鉴定为该E3的主要调节因子。

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Biochem J. 2008 May 1;411(3):581-91. doi: 10.1042/BJ20071312.
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RanBPM, Muskelin, p48EMLP, p44CTLH, and the armadillo-repeat proteins ARMC8alpha and ARMC8beta are components of the CTLH complex.RanBPM、肌联蛋白、p48EMLP、p44CTLH以及犰狳重复蛋白ARMC8α和ARMC8β是CTLH复合物的组成成分。
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PIPE: a protein-protein interaction prediction engine based on the re-occurring short polypeptide sequences between known interacting protein pairs.PIPE:一种基于已知相互作用蛋白对之间反复出现的短多肽序列的蛋白质-蛋白质相互作用预测引擎。
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Global landscape of protein complexes in the yeast Saccharomyces cerevisiae.酿酒酵母中蛋白质复合物的全球格局。
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New modules for the repeated internal and N-terminal epitope tagging of genes in Saccharomyces cerevisiae.用于酿酒酵母基因重复内部和N端表位标签的新模块。
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Degradation of the gluconeogenic enzymes fructose-1,6-bisphosphatase and malate dehydrogenase is mediated by distinct proteolytic pathways and signaling events.糖异生酶果糖-1,6-二磷酸酶和苹果酸脱氢酶的降解是由不同的蛋白水解途径和信号事件介导的。
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