• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

同时检测和解卷积包含三种同位素标记物种的拥挤核磁共振谱。

Simultaneous detection and deconvolution of congested NMR spectra containing three isotopically labeled species.

作者信息

Masterson Larry R, Tonelli Marco, Markley John L, Veglia Gianluigi

机构信息

Department of Chemistry and Biochemistry, University of Minnesota, Minneapolis, Minnesota 55455-0431, USA.

出版信息

J Am Chem Soc. 2008 Jun 25;130(25):7818-9. doi: 10.1021/ja802701w. Epub 2008 May 31.

DOI:10.1021/ja802701w
PMID:18512910
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2662704/
Abstract

We present a procedure for isolating subspectra corresponding to individual protein or peptide components in a ternary mixture or complex. Each of the three-component species is labeled differently: species A uniformly with 15N, species B uniformly with 15N and 13C, and species C uniformly with 15N but selectively with 13C' or 13Calpha. By using the dual carbon label selective HSQC (DCLS-HSQC) pulse sequence and exploiting differences in 1J 15N-13C coupling patterns to filter selected 15N resonances from detection during a constant time period, a subspectrum from each species can be generated from three spectra acquired from a single sample. Many important biological pathways involve dynamic interactions among members of multicomponent protein assemblies, and this approach offers a powerful way to monitor such processes.

摘要

我们提出了一种从三元混合物或复合物中分离出对应于单个蛋白质或肽成分的子光谱的方法。三种成分的每种都用不同的方式标记:成分A用15N均匀标记,成分B用15N和13C均匀标记,成分C用15N均匀标记但用13C'或13Calpha选择性标记。通过使用双碳标记选择性HSQC(DCLS-HSQC)脉冲序列,并利用1J 15N-13C耦合模式的差异,在恒定时间段内从检测中过滤选定的15N共振,可以从单个样品获取的三个光谱中生成每个成分的子光谱。许多重要的生物途径涉及多成分蛋白质组装体成员之间的动态相互作用,这种方法为监测此类过程提供了一种强大的方式。

相似文献

1
Simultaneous detection and deconvolution of congested NMR spectra containing three isotopically labeled species.同时检测和解卷积包含三种同位素标记物种的拥挤核磁共振谱。
J Am Chem Soc. 2008 Jun 25;130(25):7818-9. doi: 10.1021/ja802701w. Epub 2008 May 31.
2
CO_H(N)CACB experiments for assigning backbone resonances in 13C/15N-labeled proteins.用于确定13C/15N标记蛋白质中主链共振的CO_H(N)CACB实验。
J Biomol NMR. 1998 May;11(4):451-6. doi: 10.1023/a:1016040432290.
3
Sensitivity-enhanced double-TROSY experiment for simultaneous measurement of one-bond 15N-1H, 15N-13C' and two-bond 1H-13C' couplings.用于同时测量一键15N-1H、15N-13C'和两键1H-13C'耦合的灵敏度增强双TROSY实验。
J Magn Reson. 2004 Dec;171(2):270-6. doi: 10.1016/j.jmr.2004.08.020.
4
A general strategy for the assignment of aliphatic side-chain resonances of uniformly 13C,15N-labeled large proteins.一种用于确定均匀13C、15N标记的大蛋白脂肪族侧链共振峰归属的通用策略。
J Am Chem Soc. 2005 Aug 31;127(34):11920-1. doi: 10.1021/ja053539b.
5
Efficient enzymatic synthesis of 13C,15N-labeled DNA for NMR studies.用于核磁共振研究的13C、15N标记DNA的高效酶促合成。
J Biomol NMR. 1997 Oct;10(3):245-53. doi: 10.1023/a:1018358602001.
6
HNHC: a triple resonance experiment for correlating the H2, N1(N3) and C2 resonances in adenine nucleobases of 13C-, 15N-labeled RNA oligonucleotides.HNHC:一种用于关联13C、15N标记的RNA寡核苷酸腺嘌呤核苷酸碱基中H2、N1(N3)和C2共振的三重共振实验。
J Biomol NMR. 2009 Jun;44(2):101-5. doi: 10.1007/s10858-009-9323-1. Epub 2009 May 8.
7
Dual amino acid-selective and site-directed stable-isotope labeling of the human c-Ha-Ras protein by cell-free synthesis.通过无细胞合成对人c-Ha-Ras蛋白进行双氨基酸选择性和定点稳定同位素标记。
J Biomol NMR. 1998 Apr;11(3):295-306. doi: 10.1023/a:1008276001545.
8
Measurement of the protein backbone dihedral angle phi based on quantification of remote CSA/DD interference in inter-residue 13C'(i - 1)-13Calpha(i) multiple-quantum coherences.基于对残基间13C'(i - 1)-13Calpha(i)多量子相干中远程CSA/DD干扰的量化来测量蛋白质主链二面角phi。
J Biomol NMR. 2000 Jul;17(3):265-8. doi: 10.1023/a:1008393903160.
9
Spectroscopic labeling of A, S/T in the 1H-15N HSQC spectrum of uniformly (15N-13C) labeled proteins.对均匀(15N - 13C)标记蛋白质的1H - 15N HSQC谱中A、S/T进行光谱标记。
J Magn Reson. 2008 Oct;194(2):289-94. doi: 10.1016/j.jmr.2008.07.022. Epub 2008 Jul 29.
10
Amino-acid selective experiments on uniformly 13C and 15N labeled proteins by MAS NMR: Filtering of lysines and arginines.通过固体高分辨核磁共振对均匀标记13C和15N的蛋白质进行氨基酸选择性实验:赖氨酸和精氨酸的筛选
J Magn Reson. 2006 Dec;183(2):324-8. doi: 10.1016/j.jmr.2006.08.015. Epub 2006 Sep 20.

引用本文的文献

1
Probing Protein-Protein Interactions Using Asymmetric Labeling and Carbonyl-Carbon Selective Heteronuclear NMR Spectroscopy.利用不对称标记和羰基-碳选择性异核 NMR 光谱技术探测蛋白质-蛋白质相互作用。
Molecules. 2018 Aug 3;23(8):1937. doi: 10.3390/molecules23081937.
2
Simultaneous detection of intra- and inter-molecular paramagnetic relaxation enhancements in protein complexes.蛋白质复合物中分子内和分子间顺磁弛豫增强的同时检测。
J Biomol NMR. 2018 Mar;70(3):133-140. doi: 10.1007/s10858-018-0165-6. Epub 2018 Feb 2.
3
An extended combinatorial 15N, 13Cα, and 13C' labeling approach to protein backbone resonance assignment.一种用于蛋白质主链共振归属的扩展组合式15N、13Cα和13C'标记方法。
J Biomol NMR. 2015 Jul;62(3):263-79. doi: 10.1007/s10858-015-9941-8. Epub 2015 May 8.
4
Time-shared experiments for efficient assignment of triple-selectively labeled proteins.用于高效分配三选择性标记蛋白质的分时实验。
J Magn Reson. 2014 Nov;248:81-95. doi: 10.1016/j.jmr.2014.09.014. Epub 2014 Sep 30.
5
Combination of ¹⁵N reverse labeling and afterglow spectroscopy for assigning membrane protein spectra by magic-angle-spinning solid-state NMR: application to the multidrug resistance protein EmrE.¹⁵N 反向标记与余晖光谱学相结合,通过魔角旋转固态 NMR 对膜蛋白光谱进行分配:在多药耐药蛋白 EmrE 中的应用。
J Biomol NMR. 2013 Apr;55(4):391-9. doi: 10.1007/s10858-013-9724-z. Epub 2013 Mar 29.
6
Combinatorial triple-selective labeling as a tool to assist membrane protein backbone resonance assignment.组合三选择性标记作为一种辅助膜蛋白骨架共振分配的工具。
J Biomol NMR. 2012 Mar;52(3):197-210. doi: 10.1007/s10858-012-9601-1. Epub 2012 Jan 18.
7
A segmental labeling strategy for unambiguous determination of domain-domain interactions of large multi-domain proteins.一种用于明确确定大型多结构域蛋白的域-域相互作用的分段标记策略。
J Biomol NMR. 2011 Aug;50(4):403-10. doi: 10.1007/s10858-011-9526-0. Epub 2011 Jul 6.
8
Frequency-selective heteronuclear dephasing and selective carbonyl labeling to deconvolute crowded spectra of membrane proteins by magic angle spinning NMR.通过魔角旋转 NMR 对膜蛋白拥挤光谱进行频率选择异核去相位和选择性羰基标记以解卷积。
J Magn Reson. 2011 Jul;211(1):18-24. doi: 10.1016/j.jmr.2011.03.013. Epub 2011 Mar 17.
9
One-sample approach to determine the relative orientations of proteins in ternary and binary complexes from residual dipolar coupling measurements.一种通过剩余偶极耦合测量来确定三元和二元复合物中蛋白质相对取向的单样本方法。
J Am Chem Soc. 2009 Oct 14;131(40):14138-9. doi: 10.1021/ja904766g.
10
Trapping moving targets with small molecules.用小分子捕获移动目标。
Science. 2009 Apr 10;324(5924):213-5. doi: 10.1126/science.1169378.

本文引用的文献

1
Asymmetric methyl group labeling as a probe of membrane protein homo-oligomers by NMR spectroscopy.通过核磁共振光谱法将不对称甲基标记作为膜蛋白同型寡聚体的探针
J Am Chem Soc. 2008 Feb 27;130(8):2400-1. doi: 10.1021/ja711499r. Epub 2008 Feb 5.
2
Probing chemical shifts of invisible states of proteins with relaxation dispersion NMR spectroscopy: how well can we do?利用弛豫色散核磁共振波谱探测蛋白质不可见状态的化学位移:我们能做到多好?
J Am Chem Soc. 2008 Feb 27;130(8):2667-75. doi: 10.1021/ja078337p. Epub 2008 Feb 1.
3
Carbonyl carbon label selective (CCLS) 1H-15N HSQC experiment for improved detection of backbone 13C-15N cross peaks in larger proteins.用于改善大型蛋白质中主链13C-15N交叉峰检测的羰基碳标记选择性(CCLS)1H-15N HSQC实验。
J Biomol NMR. 2007 Nov;39(3):177-85. doi: 10.1007/s10858-007-9185-3. Epub 2007 Sep 9.
4
Fractional 13C enrichment of isolated carbons using [1-13C]- or [2- 13C]-glucose facilitates the accurate measurement of dynamics at backbone Calpha and side-chain methyl positions in proteins.使用[1-¹³C]-或[2-¹³C]-葡萄糖对分离出的碳进行¹³C富集分数,有助于准确测量蛋白质主链α-碳和侧链甲基位置的动力学。
J Biomol NMR. 2007 Jul;38(3):199-212. doi: 10.1007/s10858-007-9158-6. Epub 2007 Jun 7.
5
Isotopically discriminated NMR spectroscopy: a tool for investigating complex protein interactions in vitro.同位素分辨核磁共振光谱法:一种用于体外研究复杂蛋白质相互作用的工具。
J Am Chem Soc. 2007 May 23;129(20):6528-35. doi: 10.1021/ja070505q. Epub 2007 Apr 26.
6
Quantitative dynamics and binding studies of the 20S proteasome by NMR.利用核磁共振对20S蛋白酶体进行定量动力学和结合研究。
Nature. 2007 Feb 8;445(7128):618-22. doi: 10.1038/nature05512. Epub 2007 Jan 21.
7
Biomolecular NMR: a chaperone to drug discovery.生物分子核磁共振:药物发现的伴侣
Curr Opin Chem Biol. 2006 Jun;10(3):219-25. doi: 10.1016/j.cbpa.2006.04.006. Epub 2006 May 5.
8
NMR studies of protein structure and dynamics.蛋白质结构与动力学的核磁共振研究。
J Magn Reson. 2005 Apr;173(2):193-207. doi: 10.1016/j.jmr.2004.11.021.
9
NMR study of nucleotide-induced changes in the nucleotide binding domain of Thermus thermophilus Hsp70 chaperone DnaK: implications for the allosteric mechanism.嗜热栖热菌Hsp70伴侣蛋白DnaK核苷酸结合结构域中核苷酸诱导变化的核磁共振研究:对变构机制的启示
J Biol Chem. 2004 Aug 6;279(32):33958-67. doi: 10.1074/jbc.M313967200. Epub 2004 Jun 2.
10
Studies of protein-ligand interactions by NMR.
Biochem Soc Trans. 2003 Oct;31(Pt 5):1006-9. doi: 10.1042/bst0311006.