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通过定向诱变确定工程化表面盐桥对T4溶菌酶稳定性的贡献。

Contributions of engineered surface salt bridges to the stability of T4 lysozyme determined by directed mutagenesis.

作者信息

Sun D P, Sauer U, Nicholson H, Matthews B W

机构信息

Department of Physics, University of Oregon, Eugene 97403.

出版信息

Biochemistry. 1991 Jul 23;30(29):7142-53. doi: 10.1021/bi00243a015.

DOI:10.1021/bi00243a015
PMID:1854726
Abstract

Six designed mutants of T4 lysozyme were created in an attempt to create putative salt bridges on the surface of the protein. The first three of the mutants, T115E (Thr 115 to Glu), Q123E, and N144E, were designed to introduce a new charged side chain close to one or more existing charged groups of the opposite sign on the surface of the protein. In each of these cases the putative electrostatic interactions introduced by the mutation include possible salt bridges between residues within consecutive turns of an alpha-helix. Effects of the mutations ranged from no change in stability to a 1.5 degrees C (0.5 kcal/mol) increase in melting temperature. In two cases, secondary (double) mutants were constructed as controls in which the charge partner was removed from the primary mutant structure. These controls proteins indicate that the contributions to stability from each of the engineered salt bridges is very small (about 0.1-0.25 kcal/mol in 0.15 M KCl). The structures of the three primary mutants were determined by X-ray crystallography and shown to be essentially the same as the wild-type structure except at the site of the mutation. Although the introduced charges in the T115E and Q123E structures are within 3-5 A of their intended partner, the introduced side chains and their intended partners were observed to be quite mobile. It has been shown that the salt bridge between His 31 and Asp 70 in T4 lysozyme stabilizes the protein by 3-5 kcal/mol [Anderson, D. E., Becktel, W. J., & Dahlquist, F. W. (1990) Biochemistry 29, 2403-2408]. To test the effectiveness of His...Asp interactions in general, three additional double mutants, K60H/L13D, K83H/A112D, and S90H/Q122D, were created in order to introduce histidine-aspartate charge pairs on the surface of the protein. Each of these mutants destabilizes the protein by 1-3 kcal/mol in 0.15 M KCl at pH values from 2 to 6.5. The X-ray crystallographic structure of the mutant K83H/A112D has been determined and shows that there are backbone conformational changes of 0.3-0.6 A extending over several residues. The introduction of the histidine and aspartate presumably introduces strain into the folded protein that destabilizes this variant. It is concluded that pairs of oppositely charged residues that are on the surface of a protein and have freedom to adopt different conformations do not tend to come together to form structurally localized salt bridges. Rather, such residues tend to remain mobile, interact weakly if at all, and do not contribute significantly to protein stability. It is argued that the entropic cost of localizing a pair of solvent-exposed charged groups on the surface of a protein largely offsets the interaction energy expected from the formation of a defined salt bridge. There are examples of strong salt bridges in proteins, but such interactions require that the folding of the protein provides the requisite driving energy to hold the interacting partners in the correct rigid alignment.

摘要

为了在蛋白质表面构建假定的盐桥,构建了六个T4溶菌酶的设计突变体。前三个突变体,T115E(苏氨酸115突变为谷氨酸)、Q123E和N144E,旨在在蛋白质表面靠近一个或多个带相反电荷的现有基团处引入一个新的带电侧链。在每种情况下,由突变引入的假定静电相互作用包括α-螺旋连续几圈内残基之间可能形成的盐桥。突变的影响范围从稳定性无变化到解链温度升高1.5摄氏度(0.5千卡/摩尔)。在两种情况下,构建了二级(双重)突变体作为对照,其中电荷配对体从一级突变体结构中去除。这些对照蛋白表明,每个工程化盐桥对稳定性的贡献非常小(在0.15 M KCl中约为0.1 - 0.25千卡/摩尔)。通过X射线晶体学确定了三个一级突变体的结构,结果表明除了突变位点外,它们与野生型结构基本相同。尽管T115E和Q123E结构中引入的电荷距离其预期配对体在3 - 5埃范围内,但观察到引入的侧链及其预期配对体相当灵活。已经表明,T4溶菌酶中组氨酸31和天冬氨酸70之间的盐桥使蛋白质稳定3 - 5千卡/摩尔[安德森,D. E.,贝克特尔,W. J.,& 达尔奎斯特,F. W.(1990年)《生物化学》29卷,2403 - 2408页]。为了总体测试组氨酸……天冬氨酸相互作用的有效性,构建了另外三个双重突变体,K60H/L13D、K83H/A112D和S90H/Q122D,以便在蛋白质表面引入组氨酸 - 天冬氨酸电荷对。在0.15 M KCl中,pH值为2至6.5时,这些突变体中的每一个都会使蛋白质稳定性降低1 - 3千卡/摩尔。已经确定了突变体K83H/A112D的X射线晶体学结构,结果表明有0.3 - 0.6埃的主链构象变化延伸到几个残基。组氨酸和天冬氨酸的引入大概给折叠后的蛋白质引入了张力,从而使这个变体不稳定。得出的结论是,位于蛋白质表面且能够自由采取不同构象的带相反电荷的残基对,不会倾向于聚集在一起形成结构局部化的盐桥。相反,这些残基倾向于保持灵活,即使有相互作用也很微弱,并且对蛋白质稳定性没有显著贡献。有人认为,在蛋白质表面定位一对暴露于溶剂的带电基团的熵成本在很大程度上抵消了形成确定盐桥预期的相互作用能。蛋白质中有强盐桥的例子,但这种相互作用要求蛋白质的折叠提供必要的驱动能量,以使相互作用的配对体保持正确的刚性排列。

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