Banerjee Debapriya, Pal Samir Kumar
Unit for Nano Science & Technology, Department of Chemical, Biological & Macromolecular Sciences, S. N. Bose National Centre for Basic Sciences, Block JD, Sector III, Salt Lake, Kolkata 700 098, India.
Langmuir. 2008 Aug 5;24(15):8163-8. doi: 10.1021/la8010184. Epub 2008 Jun 21.
The role of dynamical flexibility at the active site of a proteolytic enzyme alpha-chymotrypsin (CHT) has been correlated with its catalytic activity. The temperature-dependent efficiency of catalysis reveals a bell-shaped feature with a peak at 37 degrees C, the typical body temperature of homeothermal animals. The overall structural integrity of the enzyme in our experimental temperature range has been confirmed from dynamic light scattering (DLS) and circular dichroism (CD) studies. We have followed the dynamical evolution at the active site of CHT with temperature using picosecond-resolved fluorescence anisotropy of anthraniloyl probe (covalently attached to the serine-195 residue) and a substrate mimic (inhibitor) proflavin. The conformational dynamics at the active site is found to have a distinct connection with the enzyme functionality. The conformational flexibility of the enzyme is also evidenced from the compressibility studies on the enzyme. The site selective fluorescence detected circular dichroism (FDCD) studies reveal that the conformational flexibility of the enzyme has an effect on the structural perturbation at the active site. We have also proposed the possible implications of the dynamics in the associated energetics.
蛋白水解酶α-胰凝乳蛋白酶(CHT)活性位点的动态灵活性作用已与其催化活性相关联。温度依赖性催化效率呈现出钟形特征,在37℃达到峰值,这是恒温动物的典型体温。通过动态光散射(DLS)和圆二色性(CD)研究,已证实我们实验温度范围内该酶的整体结构完整性。我们利用邻氨基苯甲酰探针(共价连接到丝氨酸-195残基)和底物类似物(抑制剂)黄素的皮秒分辨荧光各向异性,跟踪了CHT活性位点随温度的动态演变。发现活性位点的构象动力学与酶的功能有明显关联。对该酶的压缩性研究也证明了酶的构象灵活性。位点选择性荧光检测圆二色性(FDCD)研究表明,酶的构象灵活性对活性位点的结构扰动有影响。我们还提出了动力学在相关能量学中的可能影响。