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膜相关葡萄糖醛酸基转移酶GumK的结构与机制

Structure and mechanism of GumK, a membrane-associated glucuronosyltransferase.

作者信息

Barreras Máximo, Salinas Silvina R, Abdian Patricia L, Kampel Matías A, Ielpi Luis

机构信息

Laboratory of Bacterial Genetics, Fundación Instituto Leloir, IIBBA-Consejo Nacional de Investigaciones Científicas y Técnicas, Buenos Aires C1405BWE, Argentina.

出版信息

J Biol Chem. 2008 Sep 5;283(36):25027-35. doi: 10.1074/jbc.M801227200. Epub 2008 Jul 2.

DOI:10.1074/jbc.M801227200
PMID:18596046
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3259810/
Abstract

Xanthomonas campestris GumK (beta-1,2-glucuronosyltransferase) is a 44-kDa membrane-associated protein that is involved in the biosynthesis of xanthan, an exopolysaccharide crucial for this bacterium's phytopathogenicity. Xanthan also has many important industrial applications. The GumK enzyme is the founding member of the glycosyltransferase family 70 of carbohydrate-active enzymes, which is composed of bacterial glycosyltransferases involved in exopolysaccharide synthesis. No x-ray structures have been reported for this family. To better understand the mechanism of action of the bacterial glycosyltransferases in this family, the x-ray crystal structure of apo-GumK was solved at 1.9 angstroms resolution. The enzyme has two well defined Rossmann domains with a catalytic cleft between them, which is a typical feature of the glycosyltransferase B superfamily. Additionally, the crystal structure of GumK complexed with UDP was solved at 2.28 angstroms resolution. We identified a number of catalytically important residues, including Asp157, which serves as the general base in the transfer reaction. Residues Met231, Met273, Glu272, Tyr292, Met306, Lys307, and Gln310 interact with UDP, and mutation of these residues affected protein activity both in vitro and in vivo. The biological and structural data reported here shed light on the molecular basis for donor and acceptor selectivity in this glycosyltransferase family. These results also provide a rationale to obtain new polysaccharides by varying residues in the conserved alpha/beta/alpha structural motif of GumK.

摘要

野油菜黄单胞菌的GumK(β-1,2-葡糖醛酸基转移酶)是一种44 kDa的膜相关蛋白,参与黄原胶的生物合成,黄原胶是一种对该细菌致病性至关重要的胞外多糖。黄原胶也有许多重要的工业应用。GumK酶是碳水化合物活性酶糖基转移酶家族70的创始成员,该家族由参与胞外多糖合成的细菌糖基转移酶组成。目前尚未报道该家族的X射线结构。为了更好地理解该家族中细菌糖基转移酶的作用机制,以1.9埃的分辨率解析了无配体GumK的X射线晶体结构。该酶有两个明确的罗斯曼结构域,它们之间有一个催化裂隙,这是糖基转移酶B超家族的典型特征。此外,还以2.28埃的分辨率解析了与UDP复合的GumK的晶体结构。我们鉴定了一些具有催化重要性的残基,包括在转移反应中作为通用碱的Asp157。残基Met231、Met273、Glu272、Tyr292、Met306、Lys307和Gln310与UDP相互作用,这些残基的突变在体外和体内均影响蛋白质活性。本文报道的生物学和结构数据揭示了该糖基转移酶家族中供体和受体选择性的分子基础。这些结果也为通过改变GumK保守的α/β/α结构基序中的残基来获得新的多糖提供了理论依据。

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