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渗透压:抑制还是促进噬菌体DNA的释放?

Osmotic pressure: resisting or promoting DNA ejection from phage?

作者信息

Jeembaeva Meerim, Castelnovo Martin, Larsson Frida, Evilevitch Alex

机构信息

Department of Biochemistry, Center for Molecular Protein Science, Lund University, Box 124, S-221 00 Lund, Sweden.

出版信息

J Mol Biol. 2008 Aug 29;381(2):310-23. doi: 10.1016/j.jmb.2008.05.081. Epub 2008 Jun 6.

Abstract

Recent in vitro experiments have shown that DNA ejection from bacteriophage can be partially stopped by surrounding osmotic pressure when ejected DNA is digested by DNase I in the course of ejection. In this work, we argue by a combination of experimental techniques (osmotic suppression without DNase I monitored by UV absorbance, pulse-field electrophoresis, and cryo-transmission electron microscopy visualization) and simple scaling modeling that intact genome (i.e., undigested) ejection in a crowded environment is, on the contrary, enhanced or eventually complete with the help of a pulling force resulting from DNA condensation induced by the osmotic stress itself. This demonstrates that in vivo, the osmotically stressed cell cytoplasm will promote phage DNA ejection rather than resist it. The further addition of DNA-binding proteins under crowding conditions is shown to enhance the extent of ejection. We also found some optimal crowding conditions for which DNA content remaining in the capsid upon ejection is maximum, which correlates well with the optimal conditions of maximum DNA packaging efficiency into viral capsids observed almost 20 years ago. Biological consequences of this finding are discussed.

摘要

最近的体外实验表明,当噬菌体在DNA释放过程中被DNase I消化时,周围的渗透压可以部分阻止DNA的释放。在这项工作中,我们通过结合实验技术(通过紫外吸收、脉冲场电泳和冷冻透射电子显微镜观察监测无DNase I时的渗透压抑制)和简单的标度模型认为,在拥挤环境中完整基因组(即未消化)的释放,相反,在由渗透压应激本身诱导的DNA凝聚产生的拉力帮助下会增强或最终完成。这表明在体内,受到渗透压应激的细胞质将促进噬菌体DNA的释放而不是抵抗它。在拥挤条件下进一步添加DNA结合蛋白可增强释放程度。我们还发现了一些最佳拥挤条件,在这些条件下,释放后衣壳中残留的DNA含量最高,这与近20年前观察到的将DNA包装到病毒衣壳中的最大效率的最佳条件密切相关。本文讨论了这一发现的生物学意义。

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