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Multiple mechanisms regulate expression of low temperature responsive (LOT) genes in Saccharomyces cerevisiae.多种机制调控酿酒酵母中低温响应(LOT)基因的表达。
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Processing and quality control of DNA array hybridization data.DNA 阵列杂交数据的处理与质量控制。
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Genomic expression programs in the response of yeast cells to environmental changes.酵母细胞对环境变化响应中的基因组表达程序。
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Cellular lipid composition influences stress activation of the yeast general stress response element (STRE).细胞脂质组成影响酵母一般应激反应元件(STRE)的应激激活。
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Genome-wide analysis of gene expression regulated by the yeast cell wall integrity signalling pathway.酵母细胞壁完整性信号通路调控的基因表达的全基因组分析。
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The economics of ribosome biosynthesis in yeast.酵母中核糖体生物合成的经济学原理。
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Transcriptional profiling on all open reading frames of Saccharomyces cerevisiae.对酿酒酵母所有开放阅读框的转录谱分析。
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热休克和冷休克条件下酵母转录组的全基因组分析。

Genome-wide analysis of the yeast transcriptome upon heat and cold shock.

作者信息

Becerra M, Lombardía L J, González-Siso M I, Rodríguez-Belmonte E, Hauser N C, Cerdán M E

机构信息

Dpto. Biología Celular y Molecular, Universidad de La Coruña, F. Ciencias, Campus de La Zapateira s/n, La Coruña 15075, Spain.

出版信息

Comp Funct Genomics. 2003;4(4):366-75. doi: 10.1002/cfg.301.

DOI:10.1002/cfg.301
PMID:18629074
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2447359/
Abstract

DNA arrays were used to measure changes in transcript levels as yeast cells responded to temperature shocks. The number of genes upregulated by temperature shifts from 30 to 37 or 45 was correlated with the severity of the stress. Pre-adaptation of cells, by growth at 37 previous to the 45 shift, caused a decrease in the number of genes related to this response. Heat shock also caused downregulation of a set of genes related to metabolism, cell growth and division, transcription, ribosomal proteins, protein synthesis and destination. Probably all of these responses combine to slow down cell growth and division during heat shock, thus saving energy for cell rescue. The presence of putative binding sites for Xbp1p in the promoters of these genes suggests a hypothetical role for this transcriptional repressor, although other mechanisms may be considered. The response to cold shock (4) affected a small number of genes, but the vast majority of those genes induced by exposure to 4 were also induced during heat shock; these genes share in their promoters cis-regulatory elements previously related to other stress responses.

摘要

当酵母细胞对温度冲击作出反应时,DNA阵列被用于测量转录水平的变化。温度从30℃转变到37℃或45℃时上调的基因数量与应激的严重程度相关。在45℃转变之前,通过在37℃生长对细胞进行预适应,导致与这种反应相关的基因数量减少。热休克还导致一组与代谢、细胞生长和分裂、转录、核糖体蛋白、蛋白质合成及定位相关的基因下调。可能所有这些反应共同作用,在热休克期间减缓细胞生长和分裂,从而为细胞救援节省能量。这些基因启动子中存在假定的Xbp1p结合位点,表明了这种转录抑制因子的一种假设作用,不过也可能存在其他机制。冷休克(4℃)反应影响了少数基因,但暴露于4℃诱导的绝大多数基因在热休克期间也被诱导;这些基因在其启动子中共享先前与其他应激反应相关的顺式调控元件。