• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

受限在纳米通道和纳米狭缝中的DNA标度理论。

Scaling theory of DNA confined in nanochannels and nanoslits.

作者信息

Odijk Theo

机构信息

Complex Fluids Theory, Faculty of Applied Sciences, Delft University of Technology, 2628 BC Delft, The Netherlands.

出版信息

Phys Rev E Stat Nonlin Soft Matter Phys. 2008 Jun;77(6 Pt 1):060901. doi: 10.1103/PhysRevE.77.060901. Epub 2008 Jun 9.

DOI:10.1103/PhysRevE.77.060901
PMID:18643207
Abstract

A scaling analysis is presented of the statistics of long DNA confined in nanochannels and nanoslits. It is argued that there are several regimes in between the de Gennes and Odijk limits introduced long ago. The DNA chain folds back on itself giving rise to a global persistence length that may be very large owing to entropic deflection. Moreover, there is an orientational excluded-volume effect between the DNA segments imposed solely by the nanoconfinement. These two effects cause the chain statistics to be intricate leading to nontrivial power laws for the chain extension in the intermediate regimes. It is stressed that DNA confinement within nanochannels differs from that in nanoslits because the respective orientational excluded-volume effects are not the same.

摘要

本文对限制在纳米通道和纳米狭缝中的长链DNA统计特性进行了标度分析。研究表明,在很久以前引入的德热纳极限和奥迪克极限之间存在几种状态。DNA链自身折叠,由于熵致偏转产生了一个可能非常大的全局持久长度。此外,纳米限制仅对DNA片段施加了一个取向排除体积效应。这两种效应导致链统计特性变得复杂,从而在中间状态下链的延伸呈现出非平凡的幂律。需要强调的是,纳米通道内的DNA限制与纳米狭缝中的不同,因为各自的取向排除体积效应并不相同。

相似文献

1
Scaling theory of DNA confined in nanochannels and nanoslits.受限在纳米通道和纳米狭缝中的DNA标度理论。
Phys Rev E Stat Nonlin Soft Matter Phys. 2008 Jun;77(6 Pt 1):060901. doi: 10.1103/PhysRevE.77.060901. Epub 2008 Jun 9.
2
Kirkwood diffusivity of long semiflexible chains in nanochannel confinement.纳米通道受限环境中长半柔性链的柯克伍德扩散系数
Macromolecules. 2015 Apr 28;48(8):2829-2839. doi: 10.1021/acs.macromol.5b00377.
3
The Backfolded Odijk Regime for Wormlike Chains Confined in Rectangular Nanochannels.矩形纳米通道中蠕虫状链的后折叠奥迪克 regime 。 (注:这里“Odijk regime”可能是特定的专业术语,可能没有完全对应的非常准确通用的中文表述,保留英文是比较合适的,如果有更准确的中文释义可替换)
Polymers (Basel). 2016 Mar 14;8(3):79. doi: 10.3390/polym8030079.
4
Stripe to slab confinement for the linearization of macromolecules in nanochannels.用于纳米通道中大分子线性化的条带到平板限制。
Soft Matter. 2015 Mar 21;11(11):2279-89. doi: 10.1039/c4sm02382j.
5
Chain extension of DNA confined in channels.限制在通道内的DNA的链延伸。
J Phys Chem B. 2009 Feb 19;113(7):1843-51. doi: 10.1021/jp806126r.
6
Simulation of DNA Extension in Nanochannels.纳米通道中DNA延伸的模拟
Macromolecules. 2011 Aug 23;44(16):6594-6604. doi: 10.1021/ma201277e.
7
DNA confined in nanochannels: hairpin tightening by entropic depletion.限制在纳米通道中的DNA:通过熵耗尽实现发夹收紧
J Chem Phys. 2006 Nov 28;125(20):204904. doi: 10.1063/1.2400227.
8
Interplay between chain stiffness and excluded volume of semiflexible polymers confined in nanochannels.纳米通道中链刚性与半柔性聚合物排除体积的相互作用。
J Chem Phys. 2014 Feb 28;140(8):084905. doi: 10.1063/1.4865965.
9
Scaling regimes for wormlike chains confined to cylindrical surfaces under tension.在张力作用下,限制在圆柱表面的类蠕虫链的标度律。
Eur Phys J E Soft Matter. 2024 Jan 22;47(1):6. doi: 10.1140/epje/s10189-023-00384-6.
10
Hydrodynamics of DNA confined in nanoslits and nanochannels.限制在纳米狭缝和纳米通道中的DNA的流体动力学。
Eur Phys J Spec Top. 2014 Dec 1;223(14):3179-3200. doi: 10.1140/epjst/e2014-02326-4.

引用本文的文献

1
Molecular Structure of Foldable Bottlebrush Polymers in Melts.熔体中可折叠瓶刷聚合物的分子结构
Macromolecules. 2025 Apr 1;58(8):4320-4339. doi: 10.1021/acs.macromol.4c02981. eCollection 2025 Apr 22.
2
Assembly path dependence of telomeric DNA compaction by TRF1, TIN2, and SA1.端粒 DNA 由 TRF1、TIN2 和 SA1 压缩的组装路径依赖性。
Biophys J. 2023 May 16;122(10):1822-1832. doi: 10.1016/j.bpj.2023.04.014. Epub 2023 Apr 20.
3
Knot Factories with Helical Geometry Enhance Knotting and Induce Handedness to Knots.具有螺旋几何结构的纽结工厂增强了纽结形成并赋予纽结手性。
Polymers (Basel). 2022 Oct 7;14(19):4201. doi: 10.3390/polym14194201.
4
Silicon Carbide-Gated Nanofluidic Membrane for Active Control of Electrokinetic Ionic Transport.用于主动控制电动离子传输的碳化硅门控纳米流体膜
Membranes (Basel). 2021 Jul 15;11(7):535. doi: 10.3390/membranes11070535.
5
Single-molecule optical genome mapping in nanochannels: multidisciplinarity at the nanoscale.纳米通道中单分子光学基因组图谱绘制:纳米尺度的多学科交叉。
Essays Biochem. 2021 Apr 16;65(1):51-66. doi: 10.1042/EBC20200021.
6
Internal Motion of Chromatin Fibers Is Governed by Dynamics of Uncompressed Linker Strands.染色质纤维的内部运动受未压缩连接链动力学的支配。
Biophys J. 2020 Dec 1;119(11):2326-2334. doi: 10.1016/j.bpj.2020.10.018. Epub 2020 Oct 27.
7
Conformation of Flexible and Semiflexible Chains Confined in Nanoposts Array of Various Geometries.受限在各种几何形状纳米柱阵列中的柔性和半柔性链的构象
Polymers (Basel). 2020 May 6;12(5):1064. doi: 10.3390/polym12051064.
8
Limitations of the equivalent neutral polymer assumption for theories describing nanochannel-confined DNA.用于描述纳米通道受限 DNA 的理论中等效中性聚合物假设的局限性。
Phys Rev E. 2020 Jan;101(1-1):012501. doi: 10.1103/PhysRevE.101.012501.
9
Stretching Wormlike Chains in Narrow Tubes of Arbitrary Cross-Sections.在任意横截面的狭窄管道中拉伸蠕虫状链。
Polymers (Basel). 2019 Dec 10;11(12):2050. doi: 10.3390/polym11122050.
10
Extension distribution for DNA confined in a nanochannel near the Odijk regime.DNA 在 Odijk 区附近纳米通道中的扩展分布。
J Chem Phys. 2019 Sep 21;151(11):114903. doi: 10.1063/1.5121305.