Paris Mathilde, Pettersson Katarina, Schubert Michael, Bertrand Stephanie, Pongratz Ingemar, Escriva Hector, Laudet Vincent
Institut de Génomique Fonctionnelle de Lyon, Molecular Zoology team, Université de Lyon, Ecole Normale Supérieure de Lyon, Université Lyon 1, CNRS, INRA, Institut Fédératif 128 Biosciences Gerland Lyon Sud, France.
BMC Evol Biol. 2008 Jul 25;8:219. doi: 10.1186/1471-2148-8-219.
The origin of nuclear receptors (NRs) and the question whether the ancestral NR was a liganded or an unliganded transcription factor has been recently debated. To obtain insight into the evolution of the ligand binding ability of estrogen receptors (ER), we comparatively characterized the ER from the protochordate amphioxus (Branchiostoma floridae), and the ER from lamprey (Petromyzon marinus), a basal vertebrate.
Extensive phylogenetic studies as well as signature analysis allowed us to confirm that the amphioxus ER (amphiER) and the lamprey ER (lampER) belong to the ER group. LampER behaves as a "classical" vertebrate ER, as it binds to specific DNA Estrogen Responsive Elements (EREs), and is activated by estradiol (E2), the classical ER natural ligand. In contrast, we found that although amphiER binds EREs, it is unable to bind E2 and to activate transcription in response to E2. Among the 7 natural and synthetic ER ligands tested as well as a large repertoire of 14 cholesterol derivatives, only Bisphenol A (an endocrine disruptor with estrogenic activity) bound to amphiER, suggesting that a ligand binding pocket exists within the receptor. Parsimony analysis considering all available ER sequences suggest that the ancestral ER was not able to bind E2 and that this ability evolved specifically in the vertebrate lineage. This result does not support a previous analysis based on ancestral sequence reconstruction that proposed the ancestral steroid receptor to bind estradiol. We show that biased taxonomic sampling can alter the calculation of ancestral sequence and that the previous result might stem from a high proportion of vertebrate ERs in the dataset used to compute the ancestral sequence.
Taken together, our results highlight the importance of comparative experimental approaches vs ancestral reconstructions for the evolutionary study of endocrine systems: comparative analysis of extant ERs suggests that the ancestral ER did not bind estradiol and that it gained the ability to be regulated by estradiol specifically in the vertebrate lineage, before lamprey split.
核受体(NRs)的起源以及原始核受体是一种结合配体的转录因子还是非结合配体的转录因子这一问题最近引发了讨论。为深入了解雌激素受体(ER)配体结合能力的进化,我们对原始脊索动物文昌鱼(佛罗里达文昌鱼)的ER以及基础脊椎动物七鳃鳗(海七鳃鳗)的ER进行了比较研究。
广泛的系统发育研究以及特征分析使我们能够确认文昌鱼ER(amphiER)和七鳃鳗ER(lampER)属于ER家族。LampER表现为“典型的”脊椎动物ER,因为它能与特定的DNA雌激素反应元件(ERE)结合,并被雌二醇(E2)激活,E2是经典的ER天然配体。相比之下,我们发现尽管amphiER能结合ERE,但它无法结合E2,也不能响应E2激活转录。在所测试的7种天然和合成ER配体以及14种胆固醇衍生物中,只有双酚A(一种具有雌激素活性的内分泌干扰物)能与amphiER结合,这表明受体中存在一个配体结合口袋。考虑所有可用ER序列的简约分析表明,原始ER无法结合E2,且这种能力是在脊椎动物谱系中特异性进化而来的。这一结果不支持先前基于祖先序列重建提出的原始类固醇受体能结合雌二醇的分析。我们表明,有偏差的分类抽样会改变祖先序列的计算,且先前的结果可能源于用于计算祖先序列的数据集中脊椎动物ER的比例过高。
综上所述,我们的结果凸显了在内分泌系统进化研究中比较实验方法相对于祖先重建的重要性:对现存ER的比较分析表明,原始ER不结合雌二醇,且在七鳃鳗分化之前,它在脊椎动物谱系中获得了被雌二醇调节的能力。