• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

小干扰RNA介导的异染色质形成需要异染色质蛋白1,并与反义转录相关。

siRNA-mediated heterochromatin establishment requires HP1 and is associated with antisense transcription.

作者信息

Iida Tetsushi, Nakayama Jun-ichi, Moazed Danesh

机构信息

Department of Cell Biology, Harvard Medical School, Boston, MA 02115, USA.

出版信息

Mol Cell. 2008 Jul 25;31(2):178-89. doi: 10.1016/j.molcel.2008.07.003.

DOI:10.1016/j.molcel.2008.07.003
PMID:18657501
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2575423/
Abstract

Heterochromatic gene silencing at the pericentromeric DNA repeats in fission yeast requires the RNA interference (RNAi) machinery. The RNA-induced transcriptional silencing (RITS) complex mediates histone H3 lysine 9 (H3K9) methylation and recruits the RNA-dependent RNA polymerase complex (RDRC) to promote double-stranded RNA (dsRNA) synthesis and siRNA generation. Here we show that ectopic expression of a long hairpin RNA bypasses the requirement for chromatin-dependent steps in siRNA generation. The ability of hairpin-produced siRNAs to silence homologous sequences in trans is subject to local chromatin structure, requires HP1, and correlates with antisense transcription at the target locus. Furthermore, although hairpin siRNAs can be produced in the absence of RDRC, trans-silencing of reporter genes by hairpin-produced siRNAs is completely dependent on the dsRNA synthesis activity of RDRC. These results provide insights into the regulation of siRNA action and reveal roles for cis-dsRNA synthesis and HP1 in siRNA-mediated heterochromatin assembly.

摘要

裂殖酵母着丝粒周围DNA重复序列的异染色质基因沉默需要RNA干扰(RNAi)机制。RNA诱导的转录沉默(RITS)复合物介导组蛋白H3赖氨酸9(H3K9)甲基化,并招募RNA依赖性RNA聚合酶复合物(RDRC)以促进双链RNA(dsRNA)合成和小干扰RNA(siRNA)生成。我们在此表明,长发夹RNA的异位表达绕过了siRNA生成中对染色质依赖性步骤的需求。发夹产生的siRNA在反式作用中沉默同源序列的能力受局部染色质结构影响,需要HP1,并与靶位点的反义转录相关。此外,尽管发夹siRNA可以在没有RDRC的情况下产生,但发夹产生的siRNA对报告基因的反式沉默完全依赖于RDRC的dsRNA合成活性。这些结果为siRNA作用的调控提供了见解,并揭示了顺式dsRNA合成和HP1在siRNA介导的异染色质组装中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0021/2575423/0c436bfed7b9/nihms63387f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0021/2575423/6a05c1a5ba88/nihms63387f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0021/2575423/b33d00092591/nihms63387f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0021/2575423/f071369d3461/nihms63387f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0021/2575423/b3e237a03d97/nihms63387f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0021/2575423/e0002019c455/nihms63387f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0021/2575423/ee6e54caaa80/nihms63387f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0021/2575423/0c436bfed7b9/nihms63387f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0021/2575423/6a05c1a5ba88/nihms63387f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0021/2575423/b33d00092591/nihms63387f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0021/2575423/f071369d3461/nihms63387f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0021/2575423/b3e237a03d97/nihms63387f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0021/2575423/e0002019c455/nihms63387f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0021/2575423/ee6e54caaa80/nihms63387f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0021/2575423/0c436bfed7b9/nihms63387f7.jpg

相似文献

1
siRNA-mediated heterochromatin establishment requires HP1 and is associated with antisense transcription.小干扰RNA介导的异染色质形成需要异染色质蛋白1,并与反义转录相关。
Mol Cell. 2008 Jul 25;31(2):178-89. doi: 10.1016/j.molcel.2008.07.003.
2
Coordination of DNA replication and histone modification by the Rik1-Dos2 complex.Rik1-Dos2 复合物协调 DNA 复制和组蛋白修饰。
Nature. 2011 Jul 3;475(7355):244-8. doi: 10.1038/nature10161.
3
Heterochromatin protein 1 homologue Swi6 acts in concert with Ers1 to regulate RNAi-directed heterochromatin assembly.异染色质蛋白 1 同源物 Swi6 与 Ers1 协同作用,调节 RNAi 指导的异染色质组装。
Proc Natl Acad Sci U S A. 2012 Apr 17;109(16):6159-64. doi: 10.1073/pnas.1116972109. Epub 2012 Apr 2.
4
Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi.RNA干扰对异染色质沉默和组蛋白H3赖氨酸-9甲基化的调控。
Science. 2002 Sep 13;297(5588):1833-7. doi: 10.1126/science.1074973. Epub 2002 Aug 22.
5
Coupling of double-stranded RNA synthesis and siRNA generation in fission yeast RNAi.裂殖酵母RNA干扰中双链RNA合成与小干扰RNA生成的偶联
Mol Cell. 2007 Aug 3;27(3):449-61. doi: 10.1016/j.molcel.2007.07.007. Epub 2007 Jul 19.
6
RNA-dependent RNA polymerase is an essential component of a self-enforcing loop coupling heterochromatin assembly to siRNA production.RNA依赖的RNA聚合酶是一个自我强化回路的重要组成部分,该回路将异染色质组装与小干扰RNA的产生联系起来。
Proc Natl Acad Sci U S A. 2005 Jan 4;102(1):152-7. doi: 10.1073/pnas.0407641102. Epub 2004 Dec 22.
7
Studies on the mechanism of RNAi-dependent heterochromatin assembly.RNA干扰依赖性异染色质组装机制的研究。
Cold Spring Harb Symp Quant Biol. 2006;71:461-71. doi: 10.1101/sqb.2006.71.044.
8
Heterochromatin and RNAi are required to establish CENP-A chromatin at centromeres.异染色质和RNA干扰是在着丝粒处建立CENP-A染色质所必需的。
Science. 2008 Jan 4;319(5859):94-7. doi: 10.1126/science.1150944.
9
HP1 proteins form distinct complexes and mediate heterochromatic gene silencing by nonoverlapping mechanisms.异染色质蛋白1(HP1)形成不同的复合物,并通过不重叠的机制介导异染色质基因沉默。
Mol Cell. 2008 Dec 26;32(6):778-90. doi: 10.1016/j.molcel.2008.10.026.
10
Splicing factors facilitate RNAi-directed silencing in fission yeast.剪接因子促进裂殖酵母中RNA干扰介导的基因沉默。
Science. 2008 Oct 24;322(5901):602-6. doi: 10.1126/science.1164029.

引用本文的文献

1
RNA quality control factors nucleate Clr4/SUV39H and trigger constitutive heterochromatin assembly.RNA 质量控制因子促使 Clr4/SUV39H 形成并引发组成型异染色质组装。
Cell. 2024 Jun 20;187(13):3262-3283.e23. doi: 10.1016/j.cell.2024.04.042. Epub 2024 May 29.
2
Structural insights into the binding mechanism of Clr4 methyltransferase to H3K9 methylated nucleosome.Clr4 甲基转移酶与 H3K9 甲基化核小体结合机制的结构见解。
Sci Rep. 2024 Mar 5;14(1):5438. doi: 10.1038/s41598-024-56248-2.
3
Spt5 C-terminal repeat domain phosphorylation and length negatively regulate heterochromatin through distinct mechanisms.

本文引用的文献

1
Cohesin complex promotes transcriptional termination between convergent genes in S. pombe.黏连蛋白复合体促进粟酒裂殖酵母中同向基因间的转录终止。
Cell. 2008 Mar 21;132(6):983-95. doi: 10.1016/j.cell.2008.02.040.
2
Roles of the Clr4 methyltransferase complex in nucleation, spreading and maintenance of heterochromatin.Clr4甲基转移酶复合物在异染色质的成核、扩展和维持中的作用。
Nat Struct Mol Biol. 2008 Apr;15(4):381-8. doi: 10.1038/nsmb.1406. Epub 2008 Mar 16.
3
A cryptic unstable transcript mediates transcriptional trans-silencing of the Ty1 retrotransposon in S. cerevisiae.
Spt5 C 端重复结构域的磷酸化和长度通过不同的机制对异染色质进行负调控。
PLoS Genet. 2023 Nov 8;19(11):e1010492. doi: 10.1371/journal.pgen.1010492. eCollection 2023 Nov.
4
Transcriptional Regulation Technology for Gene Perturbation in Fission Yeast.裂殖酵母基因扰动的转录调控技术。
Biomolecules. 2023 Apr 21;13(4):716. doi: 10.3390/biom13040716.
5
Tandemly repeated genes promote RNAi-mediated heterochromatin formation via an antisilencing factor, Epe1, in fission yeast.串联重复基因通过抗沉默因子 Epe1 在裂殖酵母中促进 RNAi 介导的异染色质形成。
Genes Dev. 2022;36(21-24):1145-1159. doi: 10.1101/gad.350129.122. Epub 2022 Dec 20.
6
Investigating Mitotic Inheritance of Histone Modifications Using Tethering Strategies.利用连接策略研究组蛋白修饰的有丝分裂遗传。
Methods Mol Biol. 2022;2529:419-440. doi: 10.1007/978-1-0716-2481-4_18.
7
Defining the consequences of endogenous genetic variation within a novel family of Schizosaccharomyces pombe heterochromatin nucleating sequences.定义新型裂殖酵母(Schizosaccharomyces pombe)异染色质成核序列家族中内源性遗传变异的后果。
G3 (Bethesda). 2021 Aug 7;11(8). doi: 10.1093/g3journal/jkab185.
8
An enhancer screen identifies new suppressors of small-RNA-mediated epigenetic gene silencing.增强子筛选鉴定了小 RNA 介导的表观遗传基因沉默的新抑制因子。
PLoS Genet. 2021 Jun 22;17(6):e1009645. doi: 10.1371/journal.pgen.1009645. eCollection 2021 Jun.
9
Nuclear Envelope Proteins Modulating the Heterochromatin Formation and Functions in Fission Yeast.核被膜蛋白在裂殖酵母异染色质形成和功能中的调节作用。
Cells. 2020 Aug 16;9(8):1908. doi: 10.3390/cells9081908.
10
Mkt1 is required for RNAi-mediated silencing and establishment of heterochromatin in fission yeast.Mkt1 在 RNAi 介导的沉默和有丝分裂酵母异染色质的建立中是必需的。
Nucleic Acids Res. 2020 Feb 20;48(3):1239-1253. doi: 10.1093/nar/gkz1157.
一种隐秘的不稳定转录本介导酿酒酵母中Ty1逆转座子的转录反式沉默。
Genes Dev. 2008 Mar 1;22(5):615-26. doi: 10.1101/gad.458008.
4
Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA.肿瘤抑制基因p15通过其反义RNA发生表观遗传沉默。
Nature. 2008 Jan 10;451(7175):202-6. doi: 10.1038/nature06468.
5
Antisense RNA stabilization induces transcriptional gene silencing via histone deacetylation in S. cerevisiae.反义RNA稳定化通过组蛋白去乙酰化在酿酒酵母中诱导转录基因沉默。
Cell. 2007 Nov 16;131(4):706-17. doi: 10.1016/j.cell.2007.09.014.
6
Repeat-associated siRNAs cause chromatin silencing of retrotransposons in the Drosophila melanogaster germline.重复相关的小干扰RNA导致果蝇生殖系中逆转座子的染色质沉默。
Nucleic Acids Res. 2007;35(16):5430-8. doi: 10.1093/nar/gkm576. Epub 2007 Aug 15.
7
Coupling of double-stranded RNA synthesis and siRNA generation in fission yeast RNAi.裂殖酵母RNA干扰中双链RNA合成与小干扰RNA生成的偶联
Mol Cell. 2007 Aug 3;27(3):449-61. doi: 10.1016/j.molcel.2007.07.007. Epub 2007 Jul 19.
8
RNAi-dependent H3K27 methylation is required for heterochromatin formation and DNA elimination in Tetrahymena.RNA干扰依赖性的H3K27甲基化对于四膜虫中异染色质形成和DNA消除是必需的。
Genes Dev. 2007 Jun 15;21(12):1530-45. doi: 10.1101/gad.1544207.
9
RNAi-dependent and -independent RNA turnover mechanisms contribute to heterochromatic gene silencing.RNA干扰依赖性和非依赖性的RNA周转机制有助于异染色质基因沉默。
Cell. 2007 May 18;129(4):707-21. doi: 10.1016/j.cell.2007.03.038.
10
S. pombe LSD1 homologs regulate heterochromatin propagation and euchromatic gene transcription.粟酒裂殖酵母LSD1同源物调控异染色质传播和常染色质基因转录。
Mol Cell. 2007 Apr 13;26(1):89-101. doi: 10.1016/j.molcel.2007.02.023.