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柄杆菌目多相分类系统发育研究、奇异柄杆菌新种、嗜血红苯杆菌新种及结膜苯杆菌新种的提议,以及苯杆菌属的修订

Phylogeny by a polyphasic approach of the order Caulobacterales, proposal of Caulobacter mirabilis sp. nov., Phenylobacterium haematophilum sp. nov. and Phenylobacterium conjunctum sp. nov., and emendation of the genus Phenylobacterium.

作者信息

Abraham Wolf-Rainer, Macedo Alexandre J, Lünsdorf Heinrich, Fischer Roman, Pawelczyk Sonja, Smit John, Vancanneyt Marc

机构信息

Helmholtz Center for Infection Research, Chemical Microbiology, Inhoffenstrasse 7, Braunschweig, Germany.

出版信息

Int J Syst Evol Microbiol. 2008 Aug;58(Pt 8):1939-49. doi: 10.1099/ijs.0.65567-0.

Abstract

Three strains of Gram-negative, rod-shaped, non-spore-forming bacteria were isolated from fresh water and human blood. As determined by analyses of 16S rRNA gene sequences, the prosthecate strain FWC 38T was affiliated to the alphaproteobacterial genus Caulobacter, with Caulobacter henricii (96.8 %) and Caulobacter fusiformis (96.8 %) as its closest relatives. The non-prosthecate strain LMG 11050T and the prosthecate strain FWC 21T both belonged to the genus Phenylobacterium with Phenylobacterium koreense (96.9 %) and Phenylobacterium immobile (96.3 %) as the closest relatives. This affiliation was supported by chemotaxonomic data (polar lipids and cellular fatty acids). Physiological and biochemical tests allowed genotypic and phenotypic differentiation of the novel strains from all hitherto recognized species of the genera Caulobacter and Phenylobacterium. The strains therefore represent novel species, for which the names Caulobacter mirabilis sp. nov. (type strain FWC 38T=LMG 24261T=CCUG 55073T), Phenylobacterium conjunctum (type strain FWC 21T=LMG 24262T=CCUG 55074T), the first described prosthecate Phenylobacterium species, and Phenylobacterium haematophilum sp. nov. (type strain LMG 11050T=CCUG 26751T) are proposed. Marker nucleotides within the 16S rRNA genes were determined for the genera Asticcacaulis, Brevundimonas, Caulobacter and Phenylobacterium and the description of the genus Phenylobacterium is emended.

摘要

从淡水和人血液中分离出三株革兰氏阴性、杆状、无芽孢形成的细菌。通过对16S rRNA基因序列分析确定,具有柄的菌株FWC 38T隶属于α-变形菌纲的柄杆菌属,与亨利氏柄杆菌(96.8%)和梭形柄杆菌(96.8%)亲缘关系最近。无柄的菌株LMG 11050T和有柄的菌株FWC 21T均属于苯基杆菌属,与韩国苯基杆菌(96.9%)和不运动苯基杆菌(96.3%)亲缘关系最近。这种归属得到了化学分类数据(极性脂质和细胞脂肪酸)的支持。生理生化测试能够对新菌株与柄杆菌属和苯基杆菌属所有已确认物种进行基因型和表型区分。因此,这些菌株代表了新物种,分别命名为奇异柄杆菌新种(模式菌株FWC 38T = LMG 24261T = CCUG 55073T)、结膜苯基杆菌(模式菌株FWC 21T = LMG 24262T = CCUG 55074T,首个被描述的有柄苯基杆菌物种)和嗜血性苯基杆菌新种(模式菌株LMG 11050T = CCUG 26751T)。确定了星形柄杆菌属、短波单胞菌属、柄杆菌属和苯基杆菌属16S rRNA基因内的标记核苷酸,并对苯基杆菌属的描述进行了修订。

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