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来自大肠杆菌的分支酸变位酶-预苯酸脱氢酶所催化反应的pH依赖性

pH dependency of the reactions catalyzed by chorismate mutase-prephenate dehydrogenase from Escherichia coli.

作者信息

Turnbull J, Cleland W W, Morrison J F

机构信息

Division of Biochemistry and Molecular Biology, John Curtin School of Medical Research, Australian National University, Canberra, ACT.

出版信息

Biochemistry. 1991 Aug 6;30(31):7777-82. doi: 10.1021/bi00245a016.

Abstract

The variation with pH of the kinetic parameters associated with the mutase and dehydrogenase reactions catalyzed by chorismate mutase-prephenate dehydrogenase has been determined with the aim of elucidating the role that ionizing amino acid residues play in binding and catalysis. The pH dependency of log V for the dehydrogenase reaction shows that the enzyme possesses a single ionizing group with a pK value of 6.5 that must be unprotonated for catalysis. This same group is observed in the V/Kprephenate, as well as in the V/KNAD, profile. The V/Kprephenate profile exhibits a second ionizing residue with a pK value of 8.4 that must be protonated for the binding of prephenate to the enzyme. For the mutase reaction, the V/Kchorismate profile indicates the presence of three ionizing residues at the active site. Two of these residues, with similar pK values of about 7, must be protonated, while the third, with a pK value of 6.3, must be unprotonated. It can be concluded that all three groups are concerned with the binding of chorismate to the enzyme since the maximum velocity of the mutase reaction is essentially independent of pH. This conclusion is confirmed by the finding that the Ki profile for the competitive inhibitor, (3-endo,8-exo)-8-hydroxy-2-oxabicyclo[3.3]non-6-ene-3,5-dicarboxylic acid, shows the same three ionizing groups as observed in the V/Kchorismate profile. By contrast, the Ki profile for carboxyethyldihydrobenzoate shows only one residue, with a pK value of 7.3, that must be protonated for binding of the inhibitor.(ABSTRACT TRUNCATED AT 250 WORDS)

摘要

为了阐明可电离氨基酸残基在结合和催化过程中所起的作用,已测定了与分支酸变位酶 - 预苯酸脱氢酶催化的变位酶和脱氢酶反应相关的动力学参数随pH的变化情况。脱氢酶反应的log V对pH的依赖性表明,该酶具有一个pK值为6.5的单一可电离基团,催化时该基团必须处于未质子化状态。在V/K预苯酸以及V/KNAD曲线中也观察到了同一个基团。V/K预苯酸曲线显示存在第二个pK值为8.4的可电离残基,预苯酸与酶结合时该基团必须处于质子化状态。对于变位酶反应,V/K分支酸曲线表明活性位点存在三个可电离残基。其中两个残基具有相似的约7的pK值,必须处于质子化状态,而第三个残基的pK值为6.3,必须处于未质子化状态。可以得出结论,由于变位酶反应的最大速度基本与pH无关,所以这三个基团都与分支酸和酶的结合有关。这一结论得到了以下发现的证实:竞争性抑制剂(3 - 内型,8 - 外型)- 8 - 羟基 - 2 - 氧杂双环[3.3]壬 - 6 - 烯 - 3,5 - 二羧酸的Ki曲线显示出与V/K分支酸曲线中相同的三个可电离基团。相比之下,羧乙基二氢苯甲酸的Ki曲线仅显示一个pK值为7.3的残基,抑制剂结合时该残基必须处于质子化状态。(摘要截短于250字)

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